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Name : gabD (HNE_2325) Accession : YP_761020.1 Strain : Hyphomonas neptunium ATCC 15444 Genome accession: NC_008358 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2424101 - 2425561 bp Length : 1461 bp Strand : + Note : identified by similarity to SP:P25526; match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : ATGCCCTTGAAACTCAAAGATTCCTCGCTCCTCAAAAGTGAGGCCTTCATCGGCGGCGCCTGGCGCGCGGCCACATCTGG CGAAACTTTCGAAGTTACAAACCCCGCCACCGGCGAAACTCTGATTTCCGTCCCCAAAATGGGCGCCGACGAAACCCGCG AAGCTATCGACGCCGCCGCCAAAGCCTTCCCCGAATGGGCAGCCCTCCTCGCCGAAAAACGCTCCGCCATCCTGCGCCAG TGGTTTGATCTTCTTATGGAAAATCAGGCCGACCTCGCCGCCCTCATGACCGCCGAGCAAGGCAAATCCCTCACCGAATC CAAAGGCGAAATCGCCTACGCCGCCTCCTTCATCGAATGGTTCAGCCAGGAAGCCCGCCGCACTTATGGCGACATCATCC CCAGCCACACCCCCACCGCCCGCATCCTCGTCACCCACGAACCTGTCGGCGTTACAGCCGCCATCACGCCCTGGAACTTC CCCGCCGCCATGATCGCCCGCAAGGCCGCTGCAGCCCTCTCAGTGGGCTGCACGATGGTCGTAAAGCCCGCCTCCGCCAC GCCGCTGACCGCCCTCGCCATGGCCGTCCTGGCCGAGCGGGCCGGCATCCCTGCTGGCGTCCTCTCGGTCATCACCGGCT CTGCCGGAGACATCGGCGGCGAGCTCACCAGCAATCCCAAAGTCCGCAAGGTCAGCTTCACCGGCTCCACAGAGACCGGC AAAAAGCTGATGCAGCAAAGCGCTTCCACCCTGAAACGCCTCAGCCTGGAACTGGGCGGCAACGCGCCCTTCCTCGTCTT CGATGACGCCGACCTCGACGCCGCCGTGGAAGGCGCCATCGCCTCCAAATTCCGCAACTCCGGCCAAACCTGCGTCTGCG CCAACCGCTTTCTGGTTCAGGACAGCATCTACGATGCCTTCGCCGAAAAACTCCAGAAAGCCGTGTCAAAACTGAAGGTT GGCAACGGCATGGACGAGGGCGTCGACCAGGGCCCCCTCATCAACGACGACGCCGTGGAAACCGTCAAAGCTCACATCGA AGACGCCGTCACCAAAGGCGCCCGCATCGCGCTGGGCGGCAAGCCCCACGCCCTCGGCGGCACCTTCTTCGAGCCGACGA TCCTCCTGGACGTCCCCAAAACAGCCCGCCTCGCCAGAGAAGAAACCTTCGGCCCTGTCGCCGCCCTCTTCCGCTTCACC GATGAAGCCGAAGCCATCGCCATGGCCAACGACACCGAGTTCGGCCTCGCCGCCTACGCCTATACGAAAGACCTCGCCCG CGCCTTCCGCGTCTCCGCCGCGCTCGACTACGGCATCGTCGGCATGAATGAGGGGCTGATCTCCACTGCCATCGCCCCCT TTGGAGGCCGCAAGGAAAGCGGCTTCGGCCGCGAAGGCTCAAAGTATGGCGTCAGCGATTATCTCGACATCAAATACACG CTGATGGGCGGCCTCGGCTGA Protein sequence : MPLKLKDSSLLKSEAFIGGAWRAATSGETFEVTNPATGETLISVPKMGADETREAIDAAAKAFPEWAALLAEKRSAILRQ WFDLLMENQADLAALMTAEQGKSLTESKGEIAYAASFIEWFSQEARRTYGDIIPSHTPTARILVTHEPVGVTAAITPWNF PAAMIARKAAAALSVGCTMVVKPASATPLTALAMAVLAERAGIPAGVLSVITGSAGDIGGELTSNPKVRKVSFTGSTETG KKLMQQSASTLKRLSLELGGNAPFLVFDDADLDAAVEGAIASKFRNSGQTCVCANRFLVQDSIYDAFAEKLQKAVSKLKV GNGMDEGVDQGPLINDDAVETVKAHIEDAVTKGARIALGGKPHALGGTFFEPTILLDVPKTARLAREETFGPVAALFRFT DEAEAIAMANDTEFGLAAYAYTKDLARAFRVSAALDYGIVGMNEGLISTAIAPFGGRKESGFGREGSKYGVSDYLDIKYT LMGGLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-134 | 63 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-78 | 41 |
