Gene Information

Name : glnA (HNE_2084)
Accession : YP_760781.1
Strain : Hyphomonas neptunium ATCC 15444
Genome accession: NC_008358
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2156598 - 2158001 bp
Length : 1404 bp
Strand : +
Note : identified by similarity to SP:P05457; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653

DNA sequence :
ATGGCAGACGATCTTCTCAAGCTTATGAAGGACCAGGACGTCCAGTATGTGGACCTGCGCTTCACCGACACGCGCGGCAA
GCTGCAGCACGTGTCCTTCCACAAGGACATGGTGGACAAGAGCTTCTTCGAAGATGGCCAGATGTTTGACGGCTCCTCGA
TTGCTGGCTGGAAAGCCATCAACGAGTCCGACATGCTTCTGAAACCGGACGCGAAAGGCGCGTTCATCGACCCGTTCTTC
CAACAGACCACCCTTGTTGTGTTCTGTGACATTCTCGACCCGATCTCGGGCCAGGCTTACAGCCGCGACCCGCGCACGAC
CGCCAAGAAGGCAGAGGCTTACCTCGCCGCCTCCGGCGTTGGCGACACCGCATTCTTCGGCCCGGAAGCTGAGTTCTTCA
TCTTTGACGACGTGCGCTGGTCAACCGACCCGCACAACACGGGCTACTCGTTCGATTCGACCGAACTGCCGGCGAATTCC
GGCCGCGAATATCCGATGGGCAACCTCGGCCACCGCCCCGGCCCGAAGGGCGGCTATTTCCCCGTTCCGCCAATCGACTC
CGAGCAGGACATGCGCGGCGAGATGCTGTCGATCATGGGTGACATCGGCCTTGAGCCAGAGAAGCACCACCATGAAGTGG
CCCCGGCCCAGCACGAGCTTGGCCTGAAATTCTCGACGCTCACGGTCATGGCTGACCGGATGCAGCTCTACAAATACGTG
ATCCACCAGGTCGCCGCCTCTTACGGCAAAACCGCGACCTTCATGCCCAAACCGATGTTCAAGGACAACGGCTCGGGCAT
GCACGTTCACCAGTCGATCTGGAAAGGCGGCAAGCCGCTCTTCGCAGGCGACAAGTATGCTGATCTCTCCGAGATGTGCC
TCTACTATATCGGCGGCATCATCAAACACGCCAAGGCTCTGAACGCGATCACCAACCCATCGACCAACTCGTACAAGCGA
CTGGTCCCCGGCTATGAAGCGCCTGTGATGCTGGCTTATTCGGCACGCAACCGTTCGGCCTCGATCCGTATTCCTTACGG
CTCGAACCCGAAAGCAAAGCGTATCGAAACCCGCTTCCCTGACCCGATGGCGAACCCCTACCTCGCCTTCGCAGCCCTGC
TGATGGCTGGCCTCGACGGGATCGAGAACAAGATCCATCCGGGCGACGCGATGGACAAGGACCTCTACGACCTGCCACCG
GCAGAAGCCAAGCAGATCCCGCAGGTCTGCGGCTCGCTGCGTGAAGCCCTGGCGGCCCTCGATGCCGACCGCGCCTTCCT
CAAGAAAGGCGGCGTGTTCGACGACGACCAGATCGATGCCTACATCGAACTGAAGATGGAAGAGAACATGCGTTACGAGC
TTCATCCGCACCCGGTTGAGTTCGACATGTACTACAAGAACTAG

Protein sequence :
MADDLLKLMKDQDVQYVDLRFTDTRGKLQHVSFHKDMVDKSFFEDGQMFDGSSIAGWKAINESDMLLKPDAKGAFIDPFF
QQTTLVVFCDILDPISGQAYSRDPRTTAKKAEAYLAASGVGDTAFFGPEAEFFIFDDVRWSTDPHNTGYSFDSTELPANS
GREYPMGNLGHRPGPKGGYFPVPPIDSEQDMRGEMLSIMGDIGLEPEKHHHEVAPAQHELGLKFSTLTVMADRMQLYKYV
IHQVAASYGKTATFMPKPMFKDNGSGMHVHQSIWKGGKPLFAGDKYADLSEMCLYYIGGIIKHAKALNAITNPSTNSYKR
LVPGYEAPVMLAYSARNRSASIRIPYGSNPKAKRIETRFPDPMANPYLAFAALLMAGLDGIENKIHPGDAMDKDLYDLPP
AEAKQIPQVCGSLREALAALDADRAFLKKGGVFDDDQIDAYIELKMEENMRYELHPHPVEFDMYYKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-99 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_760781.1 glutamine synthetase, type I VFG1399 Protein 6e-98 51