|
Name : HNE_1987 (HNE_1987) Accession : YP_760687.1 Strain : Hyphomonas neptunium ATCC 15444 Genome accession: NC_008358 Putative virulence/resistance : Resistance Product : putative ATP-dependent DNA helicase recG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2062535 - 2064613 bp Length : 2079 bp Strand : + Note : identified by similarity to SP:P24230; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336 DNA sequence : ATGCGAGACGAGCGACTCTTTCCGCTGTTTGCCGGCCTTGAGACGCTTACCGGCGTCGGCCCCAAAATGACGCCCCTGCT GCAGAAGCTGGTGGGCGGGACAACGGTATGGGACCTCGTGCTCCACCTGCCTGACCGCTGGCTGGACCGGCGCGTGCGGG CAAACTTTGACGAAACCGTGCCTGGTGAAGTCGTCACCGTGAAAGGCGAGGTGCACGCCTATCACCAGCCCTTCAATGAC CGCTCCCCGCACCGCGTCCAACTTGTTGATTCTACGGGATTTCTGACGCTCTCCTATTTCCGCGCCGACCCGCGCTGGAT GAAGTCCCAGTTTCCGATCGGGGCCACCCGCATCGTCTCGGGCCGGGTGGAGGAATATCGCGGCGAGCGCCAGATTACCC ATCCCGACTTCGTGGTCGACCCTGCCAAGGGGGAAGCCCCTCCAGCCGTAGAGCCGATTTACAGCTTGAGTGCCGGCCTC ACCAACCGCCGGGTCCATACCCTCGCCTTGCAGGCCTTGAGCCTCGTGCCCGATGATTTGCCGGAATGGGCAGATCCGCA TCTTGTCGCCCAGAAAGGCTGGCCCGCTTTCAAGGAAGCGCTCAGCTGGCAGCATGATCCGAAGGTCTATGACGAAGACC GCTTCGCCCTGGCGCGGGAACGGCTCGCCTATGACGAAGCCCTCGCCCGCGAATCGGCTTTCGCCCTTGCCCAAGCCGCG CGGCGCCAGCGCCCGGCACCTATCATCAAGGCCCCGCCCAGCGCCGTGAACCGCCTGATCGACGCGTTGCCCTATCGCCC CACGGGCGCCCAGATGCGGGCGGCGGCCGACATCAGCTCGGACGTTGCGCGCGGCTATCCGATGCGCCGTTTGCTGCAAG GCGATGTGGGCGCGGGCAAGACACTGGTGGCCGCCTTTGCCGCGGTTGAGGCCGCCGCAGCGGGTTTTCAATCCGCTTTC ATGGCGCCCACCGAAGTGCTGGCCCGCCAGCAATATGACACGCTCGACGCCTTGCTTTCGCCGCTTGGCTACACTGTGGC CGCACTCTCTGGCCGCGACCGGGGCAGCGCCCGCGAAGCCACGCTGATGGGCCTCGCCGACGGGTCGATCCAGATCGTGG CAGGCACGCACGCCCTCTTTCAGGAGGCGGTGAACTTCCGGAATCTGGGCCTCATCATCGTGGACGAGCAGCACCGGTTC GGCGTGTCAGACCGGATGAAGCTCGCAGGCAAATCAGAAAACCCGCACATGCTGGTGATGAGCGCCACGCCCATTCCGCG CACGCTGGCGCAGGCGGTTCACGGCGATCTGGATGTGTCGATCCTCGACGAGAAACCGCCGGGCCGGAAACCGGTCGAAA CCCGCGCCGTGCCCGATACGCGGCTGGAAGATGTGATCGAAGCCATCGGCCGCGCCTTGAAGCGCGGCGAGCGGGCGTTC TGGGTCTGCCCGCGCGTGGATATCGAGGACGACGATTCCTCAGCCGTCGTGCGCCATGCCGCCCTGGAAGAAGAGCTGCA TGTGAAGGCGGGCCTGGTACATGGCCGCCTGAAAGCCTCCGAAAAGGACGCCGCGCTGGAAGACTTCCGCACCGGGCGCA CACGCATCCTGGTTGCCACCACGGTCATCGAAGTTGGCGTCGATGTGCCTGAAGCCACCATCATGGTGATCGAACGCGCC GAAGGCTTCGGCCTGGCCCAGCTCCACCAGTTGCGCGGACGCGTGGGCCGGGGCGACAAGCCCTCCTTCTGCCTGCTGCT CTACCGCCCGCCTCTAGGGGACACGGCGCGGGAGCGGCTCGACACCTTGCGCCGCACCGAAGACGGTTTCGAGATCGCCG AAGCCGACTTCCGCCTGCGCGGCGCTGGCGACGTTCTGGGGGTTCGGCAAGCGGGCATGACCGACTACCGGATCATTGAT CTGGCAAAACACGCCGCGCTTCTGGAAATCGCCCGCAAGGATGCCGAAGCCGTTCTGACAGGCGACCCGGACCGCAAGGG TGAGCGTTGGCAATCGCTGCGCATAGCGCGGGAACTGTTGACGCCGCGCGTGGTGCAGGGCGCCGAAACCGGCTCGTGA Protein sequence : MRDERLFPLFAGLETLTGVGPKMTPLLQKLVGGTTVWDLVLHLPDRWLDRRVRANFDETVPGEVVTVKGEVHAYHQPFND RSPHRVQLVDSTGFLTLSYFRADPRWMKSQFPIGATRIVSGRVEEYRGERQITHPDFVVDPAKGEAPPAVEPIYSLSAGL TNRRVHTLALQALSLVPDDLPEWADPHLVAQKGWPAFKEALSWQHDPKVYDEDRFALARERLAYDEALARESAFALAQAA RRQRPAPIIKAPPSAVNRLIDALPYRPTGAQMRAAADISSDVARGYPMRRLLQGDVGAGKTLVAAFAAVEAAAAGFQSAF MAPTEVLARQQYDTLDALLSPLGYTVAALSGRDRGSAREATLMGLADGSIQIVAGTHALFQEAVNFRNLGLIIVDEQHRF GVSDRMKLAGKSENPHMLVMSATPIPRTLAQAVHGDLDVSILDEKPPGRKPVETRAVPDTRLEDVIEAIGRALKRGERAF WVCPRVDIEDDDSSAVVRHAALEEELHVKAGLVHGRLKASEKDAALEDFRTGRTRILVATTVIEVGVDVPEATIMVIERA EGFGLAQLHQLRGRVGRGDKPSFCLLLYRPPLGDTARERLDTLRRTEDGFEIAEADFRLRGAGDVLGVRQAGMTDYRIID LAKHAALLEIARKDAEAVLTGDPDRKGERWQSLRIARELLTPRVVQGAETGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 8e-113 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HNE_1987 | YP_760687.1 | putative ATP-dependent DNA helicase recG | BAC0356 | Protein | 4e-96 | 42 |
