Gene Information

Name : HNE_1987 (HNE_1987)
Accession : YP_760687.1
Strain : Hyphomonas neptunium ATCC 15444
Genome accession: NC_008358
Putative virulence/resistance : Resistance
Product : putative ATP-dependent DNA helicase recG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2062535 - 2064613 bp
Length : 2079 bp
Strand : +
Note : identified by similarity to SP:P24230; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336

DNA sequence :
ATGCGAGACGAGCGACTCTTTCCGCTGTTTGCCGGCCTTGAGACGCTTACCGGCGTCGGCCCCAAAATGACGCCCCTGCT
GCAGAAGCTGGTGGGCGGGACAACGGTATGGGACCTCGTGCTCCACCTGCCTGACCGCTGGCTGGACCGGCGCGTGCGGG
CAAACTTTGACGAAACCGTGCCTGGTGAAGTCGTCACCGTGAAAGGCGAGGTGCACGCCTATCACCAGCCCTTCAATGAC
CGCTCCCCGCACCGCGTCCAACTTGTTGATTCTACGGGATTTCTGACGCTCTCCTATTTCCGCGCCGACCCGCGCTGGAT
GAAGTCCCAGTTTCCGATCGGGGCCACCCGCATCGTCTCGGGCCGGGTGGAGGAATATCGCGGCGAGCGCCAGATTACCC
ATCCCGACTTCGTGGTCGACCCTGCCAAGGGGGAAGCCCCTCCAGCCGTAGAGCCGATTTACAGCTTGAGTGCCGGCCTC
ACCAACCGCCGGGTCCATACCCTCGCCTTGCAGGCCTTGAGCCTCGTGCCCGATGATTTGCCGGAATGGGCAGATCCGCA
TCTTGTCGCCCAGAAAGGCTGGCCCGCTTTCAAGGAAGCGCTCAGCTGGCAGCATGATCCGAAGGTCTATGACGAAGACC
GCTTCGCCCTGGCGCGGGAACGGCTCGCCTATGACGAAGCCCTCGCCCGCGAATCGGCTTTCGCCCTTGCCCAAGCCGCG
CGGCGCCAGCGCCCGGCACCTATCATCAAGGCCCCGCCCAGCGCCGTGAACCGCCTGATCGACGCGTTGCCCTATCGCCC
CACGGGCGCCCAGATGCGGGCGGCGGCCGACATCAGCTCGGACGTTGCGCGCGGCTATCCGATGCGCCGTTTGCTGCAAG
GCGATGTGGGCGCGGGCAAGACACTGGTGGCCGCCTTTGCCGCGGTTGAGGCCGCCGCAGCGGGTTTTCAATCCGCTTTC
ATGGCGCCCACCGAAGTGCTGGCCCGCCAGCAATATGACACGCTCGACGCCTTGCTTTCGCCGCTTGGCTACACTGTGGC
CGCACTCTCTGGCCGCGACCGGGGCAGCGCCCGCGAAGCCACGCTGATGGGCCTCGCCGACGGGTCGATCCAGATCGTGG
CAGGCACGCACGCCCTCTTTCAGGAGGCGGTGAACTTCCGGAATCTGGGCCTCATCATCGTGGACGAGCAGCACCGGTTC
GGCGTGTCAGACCGGATGAAGCTCGCAGGCAAATCAGAAAACCCGCACATGCTGGTGATGAGCGCCACGCCCATTCCGCG
CACGCTGGCGCAGGCGGTTCACGGCGATCTGGATGTGTCGATCCTCGACGAGAAACCGCCGGGCCGGAAACCGGTCGAAA
CCCGCGCCGTGCCCGATACGCGGCTGGAAGATGTGATCGAAGCCATCGGCCGCGCCTTGAAGCGCGGCGAGCGGGCGTTC
TGGGTCTGCCCGCGCGTGGATATCGAGGACGACGATTCCTCAGCCGTCGTGCGCCATGCCGCCCTGGAAGAAGAGCTGCA
TGTGAAGGCGGGCCTGGTACATGGCCGCCTGAAAGCCTCCGAAAAGGACGCCGCGCTGGAAGACTTCCGCACCGGGCGCA
CACGCATCCTGGTTGCCACCACGGTCATCGAAGTTGGCGTCGATGTGCCTGAAGCCACCATCATGGTGATCGAACGCGCC
GAAGGCTTCGGCCTGGCCCAGCTCCACCAGTTGCGCGGACGCGTGGGCCGGGGCGACAAGCCCTCCTTCTGCCTGCTGCT
CTACCGCCCGCCTCTAGGGGACACGGCGCGGGAGCGGCTCGACACCTTGCGCCGCACCGAAGACGGTTTCGAGATCGCCG
AAGCCGACTTCCGCCTGCGCGGCGCTGGCGACGTTCTGGGGGTTCGGCAAGCGGGCATGACCGACTACCGGATCATTGAT
CTGGCAAAACACGCCGCGCTTCTGGAAATCGCCCGCAAGGATGCCGAAGCCGTTCTGACAGGCGACCCGGACCGCAAGGG
TGAGCGTTGGCAATCGCTGCGCATAGCGCGGGAACTGTTGACGCCGCGCGTGGTGCAGGGCGCCGAAACCGGCTCGTGA

Protein sequence :
MRDERLFPLFAGLETLTGVGPKMTPLLQKLVGGTTVWDLVLHLPDRWLDRRVRANFDETVPGEVVTVKGEVHAYHQPFND
RSPHRVQLVDSTGFLTLSYFRADPRWMKSQFPIGATRIVSGRVEEYRGERQITHPDFVVDPAKGEAPPAVEPIYSLSAGL
TNRRVHTLALQALSLVPDDLPEWADPHLVAQKGWPAFKEALSWQHDPKVYDEDRFALARERLAYDEALARESAFALAQAA
RRQRPAPIIKAPPSAVNRLIDALPYRPTGAQMRAAADISSDVARGYPMRRLLQGDVGAGKTLVAAFAAVEAAAAGFQSAF
MAPTEVLARQQYDTLDALLSPLGYTVAALSGRDRGSAREATLMGLADGSIQIVAGTHALFQEAVNFRNLGLIIVDEQHRF
GVSDRMKLAGKSENPHMLVMSATPIPRTLAQAVHGDLDVSILDEKPPGRKPVETRAVPDTRLEDVIEAIGRALKRGERAF
WVCPRVDIEDDDSSAVVRHAALEEELHVKAGLVHGRLKASEKDAALEDFRTGRTRILVATTVIEVGVDVPEATIMVIERA
EGFGLAQLHQLRGRVGRGDKPSFCLLLYRPPLGDTARERLDTLRRTEDGFEIAEADFRLRGAGDVLGVRQAGMTDYRIID
LAKHAALLEIARKDAEAVLTGDPDRKGERWQSLRIARELLTPRVVQGAETGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 8e-113 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HNE_1987 YP_760687.1 putative ATP-dependent DNA helicase recG BAC0356 Protein 4e-96 42