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Name : serS (HNE_1930) Accession : YP_760631.1 Strain : Hyphomonas neptunium ATCC 15444 Genome accession: NC_008358 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1999780 - 2001078 bp Length : 1299 bp Strand : - Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGTTCGACATCCGCGCCATCCGCGACAATCCCGACGCTTTCCGCAATGCCTGGAACCGGCGGAAGTCTGGATTGGGCTC CGTGGTGGACGACATTCTGAAGCTGGATGCCCAATGGCGCGAGGCGACCACCGCCAAGCAGGACGCCGAAAGCGCCCGTA ATGCCAATTCCAAGCTGATCGGTCAGGCGAAGGCCAAGAAGGACGAGGCGGAAGCCGCGCGCCTGATGGCGCTTGTCGCC GAAGCGAAGACCACAATGGAACAGGCCGGTGAAGCCGAGGACAACGCCCGCAAGGCGCTGGACGATCTGCTGATGGGCCT GCCGAACCTGCCGCTGGATGAAGTGCCCGAGGGCAGTGACGAGCATGGCAATGTTGAGCAGCACACATGGGGCGAGCCGA AGCTCATCAATGATCCCAAGGACCATGCGGATCTGGGCGAAGCCCTGAAAGGGCAGGGCGGCTTCCCGATGATGGACTTT GAAGCCGCCGCCCGGATGAGCGGCGCGCGCTTTGTGGCCCTACGCGGCAAGCTCACCCGGCTGGAGCGGGCGCTGGCGAA CTTCATGCTTGACCTTCAGACAACGGAGCATGGGTATGAGGAGATGAGCGTGCCGGTGCTGGTGCGCGATCAGGCGCTCT ATGGCACGGGGCAGTTGCCGAAGTTCGCGGAGGATTTGTTTCGCACGACTGTAGATCATTGGCTTACACCAACCGCAGAA GTTTCTCTAACAAATCTCGTCCGTGAACAGATCCTAGATGCGGCACAACTCCCCCTCCGCTTCACCGCCCACACGCCCTG CTTCCGCTCCGAAGCGGGCAGTGCGGGGCGCGATACCAAGGGCATGATCCGCCAGCACCAGTTCAACAAGGTGGAGCTGG TCTCCATCGTGGCGAATGAGGCAGAGGGGCTGGCTGAGCTGGAGCGGATGACCGGCTGCGCTGAAGAAGTGCTCAAACGC CTGGAACTGCCCTTCCGCCGCATGCTGCTCTGCACCGGCGATATGGGCGCTGGCGCGCGCAAGACCTATGATCTTGAAGT CTGGCTGCCCTCGCAGAACACCTATCGCGAGATTTCGTCCTGCTCCTATTGCGGCGACTTCCAGGCCCGCCGCATGGATG CGCGCTATCGGCCCGAACCCAAGGCCAAGCCCGAATATGTTCACACGCTGAACGGTTCGGGCCTCGCGGTGGGCCGCACG CTGGTGGCGGTACTTGAAAATTATCAGAATGCGGACGGATCGATCACTGTGCCCAAGGCGCTGGTGCCCTATATGGGCGG GGTTGAGGTTATAAACTAA Protein sequence : MFDIRAIRDNPDAFRNAWNRRKSGLGSVVDDILKLDAQWREATTAKQDAESARNANSKLIGQAKAKKDEAEAARLMALVA EAKTTMEQAGEAEDNARKALDDLLMGLPNLPLDEVPEGSDEHGNVEQHTWGEPKLINDPKDHADLGEALKGQGGFPMMDF EAAARMSGARFVALRGKLTRLERALANFMLDLQTTEHGYEEMSVPVLVRDQALYGTGQLPKFAEDLFRTTVDHWLTPTAE VSLTNLVREQILDAAQLPLRFTAHTPCFRSEAGSAGRDTKGMIRQHQFNKVELVSIVANEAEGLAELERMTGCAEEVLKR LELPFRRMLLCTGDMGAGARKTYDLEVWLPSQNTYREISSCSYCGDFQARRMDARYRPEPKAKPEYVHTLNGSGLAVGRT LVAVLENYQNADGSITVPKALVPYMGGVEVIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-84 | 49 |
