Gene Information

Name : gspG1 (HNE_1868)
Accession : YP_760569.1
Strain : Hyphomonas neptunium ATCC 15444
Genome accession: NC_008358
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1935455 - 1935913 bp
Length : 459 bp
Strand : +
Note : identified by similarity to GB:AAD05177.1; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence : 
ATGTCCCCCGAAACAGAAACAAAGACTGCAGAAGTCCGCCGCAGTGAGGCGGGTTTCTCCCTTGTCGAACTGATGGTGGT
TGTTTTCATCATGGGCCTCCTGGCCACTTTGATCATCGTCAATGTCGCGCCCGTCGGCGATCGCTCACGCGTGACCAAAG
CGCAGGCCGACATCTCAAACCTTGAGAATGCTCTCGAGCAGTACAGCCTCGACCTCTACTCCTATCCTTCCACGGATCAG
GGCCTCGCCGCGCTGTCCAGCCCGCCCGCCGGCGTCGATGCCACGCTCTACCGTCCCGGTGGCTACATCCGCCGCGTTCA
GGAAGACCCCTGGGGCAACCCCTACCAGTACACCTTCCCCGGCACGCGCTCGGGCGGCCGTTTTGACGTCTTCTCCTTCG
GCGCGGATGGCCAACCCGGCGGCGAAGGGAATGACGCAGACATCGGCAACTGGGACTGA

Protein sequence : 
MSPETETKTAEVRRSEAGFSLVELMVVVFIMGLLATLIIVNVAPVGDRSRVTKAQADISNLENALEQYSLDLYSYPSTDQ
GLAALSSPPAGVDATLYRPGGYIRRVQEDPWGNPYQYTFPGTRSGGRFDVFSFGADGQPGGEGNDADIGNWD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-30 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-30 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG1 YP_760569.1 general secretion pathway protein G VFG0180 Protein 4e-32 51
gspG1 YP_760569.1 general secretion pathway protein G VFG2050 Protein 2e-30 50
gspG1 YP_760569.1 general secretion pathway protein G VFG1871 Protein 8e-25 45