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Name : HNE_0018 (HNE_0018) Accession : YP_758752.1 Strain : Hyphomonas neptunium ATCC 15444 Genome accession: NC_008358 Putative virulence/resistance : Unknown Product : short chain dehydrogenase/reductase family oxidoreductase Function : - COG functional category : R : General function prediction only COG ID : COG4221 EC number : - Position : 12790 - 13515 bp Length : 726 bp Strand : + Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01370 DNA sequence : ATGATCCGGAACAAGGTTGTGCTGATCACCGGCGCCTCAAGCGGCATCGGCGCGGGTATTGCGCGGGAGCTTGGCGCGGC AGGCGCAAAACTCATGCTCGGCGCGCGGCGGTTGGACCGGCTTGAGGTGCTCGCCGGTGAAATTCGCGAAGCGGGCGGAG AAGCTCTTGCCCACCGTCTCGATGTAACCAGCCGTGCCGAGGCCGCCGCCTTTGCAGAAGCCGCGCGGGACGCTTTTGGC CATGTCGATGTCATCGTGAACAATGCCGGTATCATGCCGCTGTCGCTTATGGCCTCCCTGAAGGTGGAGGAATGGGACCA GATGATCGATGTAAATATCAAGGGCGTGCTGAATGGCGTGGCAGCCGTTTTGCCGGAAATGACAGCGCGCGGCTCGGGCC ACATTATCAACATCGCCTCCATCGGCGCCCTGTCTGTTGTGCCGACGGCGGCCGTCTACTGCGCCACCAAATATGCTGTG CGCGCCATCTCCGATGGTCTGCGTCAGGAGAATGACCGCATACGCGTTACCTGCATACACCCCGGCGTGGTAGAGAGCGA ACTTGCCCACACAATCACCGATCCTGTGGCAGCAGAGGCGATGAAAACCTACCGCGCCATCGCGCTACAGCCCTCTGCCA TCGGCCGGGCGGTGCGGTTTGCCATCGAGCAGCCTGAAGACGTGGACATCAACGAGATTGTTGTCCGTCCCACGGCAAGC GTCTGA Protein sequence : MIRNKVVLITGASSGIGAGIARELGAAGAKLMLGARRLDRLEVLAGEIREAGGEALAHRLDVTSRAEAAAFAEAARDAFG HVDVIVNNAGIMPLSLMASLKVEEWDQMIDVNIKGVLNGVAAVLPEMTARGSGHIINIASIGALSVVPTAAVYCATKYAV RAISDGLRQENDRIRVTCIHPGVVESELAHTITDPVAAEAMKTYRAIALQPSAIGRAVRFAIEQPEDVDINEIVVRPTAS V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 1e-35 | 46 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 2e-37 | 45 |
