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Name : HNE_1306 (HNE_1306) Accession : YP_760024.1 Strain : Hyphomonas neptunium ATCC 15444 Genome accession: NC_008358 Putative virulence/resistance : Virulence Product : DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1338783 - 1339466 bp Length : 684 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGCGTATCCTGGTTGTTGAAGACGATGCAGACCTCCGCCGGCAGCTGGCCGATGTGCTGTCGCAGTCTGGCTACGCCGT AGACCTGGCCGCCGACGGCGAGGATGGGCAATTCCTCGGCGAGACCGAGCCTTATGACGCTGTTGTGCTGGACCTTGGCC TGCCCAAGATCGACGGGGTGAGCGTGCTGAAAAGCTGGCGCAAGGAGGGCAAGACCTTTCCGGTGCTGATCCTCACGGCC CGCGATCAGTGGAGCGAGAAGGTGTCGGGCTTCGATGCCGGGGCCGATGATTACCTCACGAAGCCTTTCATCACCGAAGA GCTGCTGGCGCGGTTGCGGGCGCTGCTGCGCCGGGCGGCGGGGCATTCGGCGGCGACGATCGAGTGCGGCAAGCTGATGG TGGATACCCGCGCGGCGCGCGCGACGGTGAATGGCGAACCGATCAAGCTGACGGCGCATGAATACCGTGTTCTTTCCTAC CTGATGCATCATCAGGGCCGGGTGGTGCCGCGCACGGAGCTGGTCGAGCATATTTACGATCAGGATTTCGACCGCGATTC CAACACGATTGAGGTGTTCATCGGGCGCCTGCGGCGTAAGATCGGCCAGGACCGTATCCAGACCGAACGCGGCCTTGGCT ATCGCCTGATCGTGCCAGAGGACGAAGCGCGCGTTGCGGGCTGA Protein sequence : MRILVVEDDADLRRQLADVLSQSGYAVDLAADGEDGQFLGETEPYDAVVLDLGLPKIDGVSVLKSWRKEGKTFPVLILTA RDQWSEKVSGFDAGADDYLTKPFITEELLARLRALLRRAAGHSAATIECGKLMVDTRAARATVNGEPIKLTAHEYRVLSY LMHHQGRVVPRTELVEHIYDQDFDRDSNTIEVFIGRLRRKIGQDRIQTERGLGYRLIVPEDEARVAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 2e-26 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | NC_002516.2.879194.p | Protein | 9e-41 | 49 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | CP000647.1.gene1136. | Protein | 1e-35 | 46 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | BAC0530 | Protein | 8e-36 | 46 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | BAC0487 | Protein | 4e-31 | 45 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | CP001918.1.gene2526. | Protein | 3e-34 | 45 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | CP001138.1.gene1939. | Protein | 2e-35 | 45 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | CP004022.1.gene1005. | Protein | 3e-37 | 43 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | NC_002695.1.913289.p | Protein | 2e-33 | 43 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | CP000034.1.gene2022. | Protein | 1e-34 | 43 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | BAC0125 | Protein | 1e-28 | 42 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | BAC0111 | Protein | 3e-31 | 41 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | BAC0083 | Protein | 7e-27 | 41 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | BAC0308 | Protein | 2e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | VFG1390 | Protein | 8e-27 | 45 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | VFG0475 | Protein | 2e-35 | 45 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | VFG0473 | Protein | 3e-29 | 43 |
| HNE_1306 | YP_760024.1 | DNA-binding response regulator | VFG1389 | Protein | 4e-25 | 42 |
