Gene Information

Name : fixJ (HNE_1235)
Accession : YP_759953.1
Strain : Hyphomonas neptunium ATCC 15444
Genome accession: NC_008358
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator FixJ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1255725 - 1256342 bp
Length : 618 bp
Strand : +
Note : identified by similarity to SP:P10958; match to protein family HMM PF00072; match to protein family HMM PF00196

DNA sequence : 
ATGACTGACAACCGCCTTATCCATCTCGTCGATGACGACGAAGCCATCCGCCACTCCGCGAGCTTCATGCTGCGCCATGC
CGGCTTTCGCGTGAAAACCTATGTCGATGGCGTCGCCTTTCTGGAGCAGGCGGGCGAAGCCGAAAAAGGCTGCATCCTGC
TGGATGTCCAGATGCCGAAGATGGACGGCCTGCAGGTGCAGGAAGCGCTGAATGAACGCGGCGTGGCCATGCCGGTCATC
GTCCTGACGGGGCATGGCGATGTCGCCGTTGCCGTCCGTGCGATGAAAGCAGGCGCGGTGGATTTTGTCGAAAAGCCTTA
TGCAAAGCAGACCCTGGTCGACGCGCTCACCCGCGCGTTCGAGCGTCTGGAATCGCGCCGCAAGGAAGACGTGCTCGCCG
ATGAAGCGCGCGGCCTGATCGAAAATCTTACCGCCCGCGAGAAAGAAGTTCTTCATGGCCTGGTCGATGGCCAGACCAAC
AAGGAAATCGCCATCTCGCTGGATATTTCTCCGCGCACGGTTGAAATTCATCGAGCTAATGTGATGGAAAAGATGGGGGC
ATCCAACCTGTCCACGGTGCTTCGTATTGCCTTCGCCGCAGGCATTGGCCTTGAATAA

Protein sequence : 
MTDNRLIHLVDDDEAIRHSASFMLRHAGFRVKTYVDGVAFLEQAGEAEKGCILLDVQMPKMDGLQVQEALNERGVAMPVI
VLTGHGDVAVAVRAMKAGAVDFVEKPYAKQTLVDALTRAFERLESRRKEDVLADEARGLIENLTAREKEVLHGLVDGQTN
KEIAISLDISPRTVEIHRANVMEKMGASNLSTVLRIAFAAGIGLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-31 43
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 5e-31 43
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 5e-31 43
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 5e-31 43
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fixJ YP_759953.1 DNA-binding response regulator FixJ VFG0488 Protein 1e-31 43