Gene Information

Name : Mmar10_0382 (Mmar10_0382)
Accession : YP_755613.1
Strain : Maricaulis maris MCS10
Genome accession: NC_008347
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 457180 - 458703 bp
Length : 1524 bp
Strand : +
Note : KEGG: xac:XAC0696 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase

DNA sequence :
GTGACTGAGACCGCTGATACTGCATCGGCCCGCACACCGGTCACCTACGCCTTCGCCCGCCAGACGGGCGTCGCCTACCA
GCCCGCTGACACGGCCAGCGGCGTCGGCGCCTTCCTGCTGCGCAGCGGTGCCGACCGTCGTGCCTTGCTGGAATTGCGAC
GCGTGGTGGGACGGACCTGTCCGGTGCGCGAATGCCCGCCCGGCGAGTATGACCGCGCCCTGTCGGACATCTATGCCTAT
TCCGGCCTCGGCGAGGACGCGATCGACAGCGCCGATGAGAGCGATGAAAGCCTGTCGCGCCTGATCGACGAGATGCCGCG
CACCGAGGACCTGCTCGACAGTGACAGCGATGCGCCGATCATCCGGCTGATCAATGGCATGATCGCCGAGGCCGTGCGGA
CGGCCGCCTCTGACGTCCATGTCGAACCCTTCGAGGACCGGGTCTCGATCCGTTACCGGGTCGATGGCGTCTTGCACGAG
ACGGCCGCCGTGCCGCCGCGTCTGGCATCGCCGCTGGTATCGCGGATCAAGGTCATGGCCCGCCTCGACATTGCCGAGAA
ACGCATCCCCCAGGATGGTCGCCTGTCGATCTCGCTGGGCGGGCAGTCGGTCGATGTCCGTGTCTCCACCCTGCCATCGC
GGCATGGCGAACGGGTGGTCCTGCGCCTGCTCGACAATTCCGCAGCGCGCTTCAAGCTCGACGACCTGGGCATGCCGGCG
ACGATGCTGGCCGACATGAAGAAGGCGCTGGCCCAGCCCAATGGCATCATCCTGGTCACCGGTCCGACCGGTGCCGGCAA
GACCACAACCCTCTATGCGGGGCTGAACCTGCTCAATGAGGAAACCCGCAATATCCTCACTGTCGAGGACCCGGTCGAAT
ACGCCATCGACGGGATCGGTCAGACCCAGGTCAATGCCAAGGTCGGCATGACATTCGCCGCCGGTCTGCGCGCCATCCTG
CGCCAGGACCCGGACATCGTCATGGTCGGCGAGATCCGCGATGTCGAGACCGCGCAGATCGCGGTCCAGGCCAGCCTGAC
CGGCCATCTCGTCCTGTCGACCGTGCACACCAATTCGGCCGTCGCCGCCATACCGCGCCTGCGCGACATGGGCGTTGAAA
GCTATCTGCTGGCCTCGACCCTGACCGCGATTGTCGCCCAGCGCCTGGTGCGCCGCCTGTGCGGCCATTGCCGCGAGGCC
TATACGCCGGACGCCGCCGAACTGGCCCTGCTGGGTCTGACCGGGCGGGCCGATGTGACCTTGTGGAAGCCGGTCGGTTG
CCCCCATTGCAAGCAGACCGGACATGACGGTCGGACCGGGCTCTATGAGCTGGTCATGGTCGACGACACATTGCGCAAGC
ATATCCATGACGATGCCCGCGAGGCCGACATGGCGGCGCACGCCTTCGCCCATCGCCCGACCCTGTTCCGCAATGGTGTC
GAGCTGGCGCTGGCGGGAACGACCAGCCTGGCCGAAATCCTGCGCGTCTGCCGTGAGGAAGGCGAGCGTCATGCCGGCGT
TTGA

Protein sequence :
MTETADTASARTPVTYAFARQTGVAYQPADTASGVGAFLLRSGADRRALLELRRVVGRTCPVRECPPGEYDRALSDIYAY
SGLGEDAIDSADESDESLSRLIDEMPRTEDLLDSDSDAPIIRLINGMIAEAVRTAASDVHVEPFEDRVSIRYRVDGVLHE
TAAVPPRLASPLVSRIKVMARLDIAEKRIPQDGRLSISLGGQSVDVRVSTLPSRHGERVVLRLLDNSAARFKLDDLGMPA
TMLADMKKALAQPNGIILVTGPTGAGKTTTLYAGLNLLNEETRNILTVEDPVEYAIDGIGQTQVNAKVGMTFAAGLRAIL
RQDPDIVMVGEIRDVETAQIAVQASLTGHLVLSTVHTNSAVAAIPRLRDMGVESYLLASTLTAIVAQRLVRRLCGHCREA
YTPDAAELALLGLTGRADVTLWKPVGCPHCKQTGHDGRTGLYELVMVDDTLRKHIHDDAREADMAAHAFAHRPTLFRNGV
ELALAGTTSLAEILRVCREEGERHAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-118 53
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-118 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmar10_0382 YP_755613.1 general secretory pathway protein E VFG0182 Protein 2e-116 54
Mmar10_0382 YP_755613.1 general secretory pathway protein E VFG2048 Protein 2e-117 53
Mmar10_0382 YP_755613.1 general secretory pathway protein E VFG1876 Protein 4e-115 50
Mmar10_0382 YP_755613.1 general secretory pathway protein E VFG2426 Protein 5e-74 47
Mmar10_0382 YP_755613.1 general secretory pathway protein E VFG0112 Protein 3e-80 45