Gene Information

Name : Mmar10_3032 (Mmar10_3032)
Accession : YP_758251.1
Strain : Maricaulis maris MCS10
Genome accession: NC_008347
Putative virulence/resistance : Resistance
Product : major facilitator transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 3316990 - 3318276 bp
Length : 1287 bp
Strand : +
Note : PFAM: major facilitator superfamily MFS_1; KEGG: lic:LIC12361 permease

DNA sequence :
ATGTCCGCGCGCACGCCCGGCAAACACGCGATCATCTTCATTTTCGTGACTGTTCTGATCGACATGATCGGCTTTGGCCT
GATCATACCGGTGATGCCGGACCTGATCGAGGAACTGACCGGTCTGCAGGCCAATAATGCCGCGGTGCTGGGCGCTTGGC
TGATGGTCTCCTATGCCGGCATGCAATTCGTGTTCGCGCCTATCATCGGCGGATTGTCAGACCGTTTCGGTCGCCGACCG
GTCTTGCTGGCCGCCTTGGGCGGCTTCGCCATCGACTACCTGATCATGGGGTTTGCGCCGGTATTCTGGCTGTTGATCGT
GGGCCGGATTCTCGCCGGCATTTTCGGGGCCAGCTATTCGACTGCGAACGCTTTCATCGCCGACATCACCCCACCGGAAC
AGCGTGCAGCCCGATTTGGTCTGATCGGGGCGGCATTTGGCGTCGGATTTACGCTGGGTCCGGCAATCGGCGGCTTCCTG
GGTGACAGTTTCGGTCCGCGCGCGCCCTTTTTTGCCGCCGCTGTTCTGGCCGGCGCCAATTTCATTTATGGCCTGATCAT
CCTGCCGGAGACACTGAAGGCGGAGAACAGGCGTCCCTTCGACATCATGCGCGCCAATCCGCTGGGGTCGCTCCTGCAGA
TGCGCAAATACCCGGCCGTTCTGGTTCTGATGTCAGCCATCTTCCTGATGTTGCTGGGCCATTCAGTCTACCCGGCGATC
TGGTCCTACTATACGGACTTCAAATTCGGCTGGAGTTCGCGAGACATCGGACTGTCGCTCATGGCGGTGGGGTTGAGCTC
GGCGATCGTGCAGGGTGGCCTGACCCGGATTCTGGTGCCCAAGCTGGGGGAATGGCGGGCAATCGCCCTGTCGCTCTCAC
TGGCCGTTATCGCCTACGCGCTCTACGGCCTCGCGACGACCGGATGGATGGTCTATGCGATCATCCTGTTCGCAGCGCTG
GGAGGGATCGGTCAGCCGGCGCTGCAGGGGGTCATGTCCCGCATCGTTCCGGCCAATGCACAGGGCGAGTTGCAGGGGGC
GATGACGTCGCTGCAAAGCCTGTCGATGATTGTCGGGCCGCTGGTCATGTCCCGCATCTTCTCGCACTTCTCCGATGACG
CCGCGCCCATAACCCTGCCTGGCATGCCGTTTCTCGTTGCGTCAGGCCTGACCTTGTTGGCGTTGTTCATAGGTCTCAGT
GCCCGACGGCACGATCCCGGGCCGAAACAGGACGGCGCACCAGTCGATGAGCGAGCGACGCGGCCGGTCACCGACGCTGC
CGAGTAG

Protein sequence :
MSARTPGKHAIIFIFVTVLIDMIGFGLIIPVMPDLIEELTGLQANNAAVLGAWLMVSYAGMQFVFAPIIGGLSDRFGRRP
VLLAALGGFAIDYLIMGFAPVFWLLIVGRILAGIFGASYSTANAFIADITPPEQRAARFGLIGAAFGVGFTLGPAIGGFL
GDSFGPRAPFFAAAVLAGANFIYGLIILPETLKAENRRPFDIMRANPLGSLLQMRKYPAVLVLMSAIFLMLLGHSVYPAI
WSYYTDFKFGWSSRDIGLSLMAVGLSSAIVQGGLTRILVPKLGEWRAIALSLSLAVIAYALYGLATTGWMVYAIILFAAL
GGIGQPALQGVMSRIVPANAQGELQGAMTSLQSLSMIVGPLVMSRIFSHFSDDAAPITLPGMPFLVASGLTLLALFIGLS
ARRHDPGPKQDGAPVDERATRPVTDAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 2e-51 45
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 1e-51 45
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 2e-51 44
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 2e-51 44
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 2e-51 44
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 3e-51 44
tet(G) AAK02051.1 tetracycline resistance protein Not tested SGI1 Protein 9e-42 43
tetA(G) ABZ01843.1 TetA(G) Not tested SGI2 Protein 9e-42 43
tetA(G) AGK06974.1 TetA(G) Not tested SGI1 Protein 9e-42 43
tetA(G) AGK07104.1 TetA(G) Not tested SGI1 Protein 9e-42 43
tetA CAJ77034.1 Tetracycline resistance protein Not tested AbaR1 Protein 9e-43 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmar10_3032 YP_758251.1 major facilitator transporter NC_010410.6002597.p0 Protein 7e-52 45
Mmar10_3032 YP_758251.1 major facilitator transporter CP001485.1.gene2821. Protein 7e-52 45
Mmar10_3032 YP_758251.1 major facilitator transporter AF534183.gene.p01 Protein 6e-52 45
Mmar10_3032 YP_758251.1 major facilitator transporter NC_011586.7045189.p0 Protein 1e-47 44
Mmar10_3032 YP_758251.1 major facilitator transporter AY264780.2.gene3.p01 Protein 3e-54 44
Mmar10_3032 YP_758251.1 major facilitator transporter Y19114.gene.p01 Protein 6e-49 43
Mmar10_3032 YP_758251.1 major facilitator transporter X75761.gene.p01 Protein 2e-50 43
Mmar10_3032 YP_758251.1 major facilitator transporter AF133140.gene.p01 Protein 5e-43 42
Mmar10_3032 YP_758251.1 major facilitator transporter AF133139.gene.p01 Protein 7e-42 42
Mmar10_3032 YP_758251.1 major facilitator transporter NC_010410.6002612.p0 Protein 5e-43 42
Mmar10_3032 YP_758251.1 major facilitator transporter AF090987.gene.p01 Protein 1e-47 42