Gene Information

Name : rph (Mmar10_3006)
Accession : YP_758225.1
Strain : Maricaulis maris MCS10
Genome accession: NC_008347
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3286964 - 3287680 bp
Length : 717 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGACCCCATGGACGCGCTCGCGATGCAATGCGTGAAATCAAGCTGGAAGCCGGTGTCTCGGTCTATGCGGAGGGCTC
CTGCCTGGCTCGCTTCGGTGGCACGCATGTGCTGTGCACGGCCAGCATCGAAGAGAGCGTGCCGCCATGGATGCGCGGGG
GCGGCAAGGGCTGGGTGACAGCAGAATACGGCATGCTGCCGCGGGCCACCCATACACGGTCACGCCGTGAGGCGACCGCC
GGCAAGCAGTCCGGCCGGACCCAGGAAATCCAGCGCCTGATCGGTCGCTCCCTGCGCGCCGTCGTGGATCTCAAGGCGCT
CGGTGAACGCCAGATCACCATCGACTGTGATGTGCTGCAGGCCGATGGCGGCACACGCACAGCAGCAATCACCGGCGCCT
GGGTCGCACTCAAGCAGGCCACCGGATATCTGATCGAGGAAGGCTTGCTGACCAGCGACCCGGTGCACGGCCAGCTCGCG
GCCATCTCCTGCGGCGTGATTGATGGTGAGACCCGCCTCGACCTCGAATACGAGGAAGACCGTCGCGCCGAGGCCGACGC
CAATTTCGTCCTCACCGACACAGGCGGCATCGTCGAGATCCAGGCCACGGCGGAAGACAAGCCGATTCCGGAGACCGATT
TCGACCTGCTGTTCGCGCTCGCCAAGGCCGGTGTTGTCGATCTGTGCGAGGCGCAACTTGCAGCGTTGAAGGGTTAG

Protein sequence :
MRPHGRARDAMREIKLEAGVSVYAEGSCLARFGGTHVLCTASIEESVPPWMRGGGKGWVTAEYGMLPRATHTRSRREATA
GKQSGRTQEIQRLIGRSLRAVVDLKALGERQITIDCDVLQADGGTRTAAITGAWVALKQATGYLIEEGLLTSDPVHGQLA
AISCGVIDGETRLDLEYEEDRRAEADANFVLTDTGGIVEIQATAEDKPIPETDFDLLFALAKAGVVDLCEAQLAALKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-46 52