Gene Information

Name : fliP (Mmar10_1940)
Accession : YP_757170.1
Strain : Maricaulis maris MCS10
Genome accession: NC_008347
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2120833 - 2121588 bp
Length : 756 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGAGTGCCCGCAAAGGCTTCTGGTTCTGTTTTTCGCTGTTTCTGCTGGGCGTAATCACCCTGATCGGCTTCCAGGCCGA
TGCGCAGACCGTGACCATCGATGCCGGCCAGGAGGGCGCACTGACCGAGCGAGTCCTGCAGCTGATGGCGCTGTTGACCG
TGCTGTCGTTGGCGCCGTCCATCATCATCATGACCACCAGCTTCGTACGCATCATCGTGGTGCTGTCGCTGCTGCGAACC
GGGCTGGGCCTGCAGCAGAGCCCGCCGAACGCGGTCCTGGTCTCGCTGGCCATCTTCATGACCGGCTTCATCATGGCGCC
GGTCTTCACCCAGTCCTATGACGAGGGCATCCAGCCCCTGCTGAACGAAGAGATCGAGCTGACCGAGGCCTTCGACCTTT
CGACCGCGCCACTCAAGACCTTCATGCTCAGCCATGTCCGCGAGGACGATCTCGCCCTGTTTATCGACATGTCCCAGGAG
GCCGTTCCGGAATCGCCGGAAGCGACCTCGTTCTGGATCGTCGCTCCGGCCTTCATGATCTCGGAATTGCGCCGCGCCTT
CGAGATCGGCTTCCTGCTGTTCATCCCCTTCCTGATCATCGATCTCGTCGTCGCCTCGATCCTGATGTCGATGGGCATGA
TGATGCTGCCCCCGATCGTCATCTCGCTACCGTTCAAGCTGATCTTCTTCGTTCTGGTCGATGGCTGGCGACTGGTAGTG
GGATCATTGGTGCAGAGTTTCGGGACATTGAGTTGA

Protein sequence :
MSARKGFWFCFSLFLLGVITLIGFQADAQTVTIDAGQEGALTERVLQLMALLTVLSLAPSIIIMTTSFVRIIVVLSLLRT
GLGLQQSPPNAVLVSLAIFMTGFIMAPVFTQSYDEGIQPLLNEEIELTEAFDLSTAPLKTFMLSHVREDDLALFIDMSQE
AVPESPEATSFWIVAPAFMISELRRAFEIGFLLFIPFLIIDLVVASILMSMGMMMLPPIVISLPFKLIFFVLVDGWRLVV
GSLVQSFGTLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-24 44
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_757170.1 flagellar biosynthesis protein FliP VFG2338 Protein 4e-40 53
fliP YP_757170.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-44 52
fliP YP_757170.1 flagellar biosynthesis protein FliP VFG2494 Protein 2e-42 51
fliP YP_757170.1 flagellar biosynthesis protein FliP VFG2016 Protein 7e-41 48
fliP YP_757170.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-27 45
fliP YP_757170.1 flagellar biosynthesis protein FliP VFG0188 Protein 1e-25 43