Gene Information

Name : Swol_2457 (Swol_2457)
Accession : YP_755117.1
Strain : Syntrophomonas wolfei Goettingen
Genome accession: NC_008346
Putative virulence/resistance : Resistance
Product : lipoprotein release ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2787911 - 2788645 bp
Length : 735 bp
Strand : +
Note : KEGG: tte:TTE1199 ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
ATGATTAAGATAAATAATCTCAGCAAAACCTATTCCACCGGCGCCTTTACCGTACCGGCATTAAAGGGAATCACCCTGGA
TATTGCCCCCGGCGAATTCGTGGCCATCACCGGAGCTTCGGGTTCGGGTAAATCCACCATGATGAATCTCCTGGGCTTGC
TGGACCGTCCCAGCGAGGGGAGTTACCTGCTGGACGGCATGGATGTATCCAACCTGAATGATGATGACTATGCCCGCTTA
AGAAATCGCAAAATCGGTTTTGTTTTTCAAGCTTTTAATCTCCTGCCGCGTTTGACTGCCTTGAAAAATGTAGAGTTATC
CATGCTTTATGCAGGCACAAAGCACGAAGAGCGCCGGAAGAGAGCGCTGGAAGTCTTGACCCTACTGGGCCTGGAAGACC
GGCTGCATCATTTTCCCAATGAATTGTCCGGGGGGCAGAACCAGCGGGTGGCCATCGCCCGGGCTCTGATCAACAACCCG
GCCATAATCCTGGCTGACGAGCCTACCGGAGCCCTGGATAGCCAGACCGGCCTGGAGATAATGAGCATATTTCAAGAATT
AAACCGCCAGGGAACCACCATAGTTCTGGTTACTCACGAATTAAACATTGCCCGGCACTCCCGGCGCATACTTCGTATGG
CTGACGGCTTGATAATAAACGATGAGGAAATAGCCCGGCCCCTTGATGCCCATAACGAAATCCAGGCACTCCGGGAAAAG
GGGGGCAGGGCATGA

Protein sequence : 
MIKINNLSKTYSTGAFTVPALKGITLDIAPGEFVAITGASGSGKSTMMNLLGLLDRPSEGSYLLDGMDVSNLNDDDYARL
RNRKIGFVFQAFNLLPRLTALKNVELSMLYAGTKHEERRKRALEVLTLLGLEDRLHHFPNELSGGQNQRVAIARALINNP
AIILADEPTGALDSQTGLEIMSIFQELNRQGTTIVLVTHELNIARHSRRILRMADGLIINDEEIARPLDAHNEIQALREK
GGRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swol_2457 YP_755117.1 lipoprotein release ABC transporter ATPase NC_012469.1.7686878. Protein 4e-55 53
Swol_2457 YP_755117.1 lipoprotein release ABC transporter ATPase NC_008702.1.4606598. Protein 1e-46 50
Swol_2457 YP_755117.1 lipoprotein release ABC transporter ATPase CP001581.1.gene798.p Protein 2e-43 46
Swol_2457 YP_755117.1 lipoprotein release ABC transporter ATPase CP001581.1.gene598.p Protein 7e-40 44
Swol_2457 YP_755117.1 lipoprotein release ABC transporter ATPase NC_012469.1.7685735. Protein 5e-36 43