Gene Information

Name : Swol_2367 (Swol_2367)
Accession : YP_755027.1
Strain : Syntrophomonas wolfei Goettingen
Genome accession: NC_008346
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2699943 - 2702429 bp
Length : 2487 bp
Strand : -
Note : KEGG: mta:Moth_0162 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGTTTAGAAGATTTACCCAGAGAGCCAGAAATGCGGTTATTCACGCTCAGGAAGAAGCCCGCCAGTTGAATCACCCGGC
TATTGGTACCGAGCATATTCTTTTAGGCTTATTACGGGAAGGCGAGGGTGTTGGTGCCCGGGCTTTGCTTAACAGCGGTA
TTGACCTGGAAAAAGTGCGGGAAGAAATCAACCGGGTAATAGGTGCCAATGGCGAAGCTGTGGAAAAACCGGCTGGAGAC
TTGCCGGTTACTCCTCGGGCTAAAAAGGTTTTTAACCTGGCTTTTGATGAAGCGCGTTTACAGGGAGTCAATTATGTAGG
CACCGAACATCTTTTACTGGCAGTATTAAGAGAAGAAGAAGGGGTGGCTGGCCAAGTTTTACACTCTATGGGTGTTAAGC
TGGACCAGATCCGGGAGCAGGTTATGTTGCTTCTGGGGGGAGATGTATCCTCAACTTACCATAACCCAAATGCCTATCAG
GATACAGCAAGTCAGCCCAATCAACAGGCTAGGAAGAGAGCCCGGAGCAAAACGCCTACCCTGGATAGCTTTAGCCGTGA
TTTAACTCAGGATGCCAGCGAAGGAAGGCTGGATCCGGTTATTGGCCGGAATAATGAAATCGAGAGAGTTATACAGATTC
TATCCCGCCGCACCAAAAATAACCCGGTATTGATTGGTGATCCGGGGGTGGGGAAAACCGCTATAGTTGAGGGATTGGCC
CAGCGAATTATGGACAACCAGATCCCGGAGATATTAAGCAACAAAAGGGTGGTGGCTCTCGATCTGTCCGCTATGGTAGC
CGGGACCAAATACCGGGGTGAGTTTGAGGAGCGTCTGACCAGGATAGTAAATGAAATAAAATCATCCGGTGATGTAATTG
TATTTATTGATGAGCTTCATACCATAGTGGGAGCGGGAGCAGCCGAAGGAGCCATCGATGCGGCCAATATACTCAAACCT
TCCCTGGCCCGGGGAGAGTTTCAGTGTGTAGGAGCTACTACCCTGAATGAGTACCGTAAACATGTGGAAAAGGATGCTGC
CCTGGAAAGGAGATTTCAACCCATTCTGGTGGAGGAGCCCAGTATCGAGGAAAGTATTGAAATTCTAAAGGGATTAAGGG
ATCGTTATGAAGCTCACCATGGGGTCAAGATAGGAGATGAAGCCATTGAGGCGGCGGCCAAGCTTTCCGCCCGCTATATC
AGCGACCGGTTCTTACCCGACAAGGCTATCGACCTGATTGATGAGGCTTCATCCCGGGTCAGGCTGGCCAATTATATTAT
CCCCGAGGATTTGAAGAAGAAGGAAAGCCAACTGGAAGACCTGATCAAGGAAAAAGAAGAGGCTATCAATGGCCAGGAAT
ACGAAAAAGCCGCCCGCCTGAGAGATGAAGAACAGAAGCTTAGAGATGAGATAGAGAATGAAAGAAAAGAATGGTCAAGC
CAGCGCAGTTTGAATGCAGGAAGTGTAGGCGAAGATGAAATTGCGGCAGTGGTTTCAAGTTGGAGCGGTATACCGGTAAA
CAAACTGGCAGAAGAAGAGAGTGAACGTTTGGTGCAAATGGAAGATGTACTGCATCAGAGAGTAATAGGCCAGGAAGAGG
CAGTAAAAGCCGTTTCTCGTGCGGTAAGACGGGCCCGGGCCGGTTTGAAGAATCCCAAACGTCCTATCGGCTCCTTCGTT
TTTTTGGGTCCCACGGGGGTGGGAAAAACAGAACTGGCGCGCAGCTTGGCAGAAGCCATGTTCGGCAGTGAGGATGCCAT
AATCAGGCTGGATATGTCCGAATATATGGAAAAGCATGCCGTATCCAGGATGATTGGCTCGCCTCCCGGATATGTGGGTT
ATGATGAAGGAGGACAATTAACCGAAAAAGTCAGGAGAAAGCCTTATTCTGTTATTCTTCTGGATGAAATTGAGAAGGCC
CATCCTGATGTATTTAATATACTCCTGCAGGTTATGGAAGATGGCCGCTTAACGGATGGACAGGGACGAACAGTGGACTT
TAGAAATACCGTGGTTATCATGACCTCCAATGTCGGGGCTGATTCTATTAAGAATAGCAAAAAAGTAGGTTTTACCAGGG
CTATTGATGAGGCTCATGATTATAGCCAGATGAAAGAAAGGGTTATGGAGCAATTAAAACATACCTTTAAGCCGGAGTTT
ATGAATCGGATTGATGAAATAATTGTCTTCCAGAACCTCAATGAGCAGGAATTAAAGGAAATAGTTGATTTATTATTGTT
AGACCTGAAAGAAAGAGTTAAAGAGAATGGCTATGGAATGGAGATAAGCCCCGCAGCTCGAGAATTAATATTAAAAGAAG
GATATGATCCGGCTTTTGGAGCCCGACCCCTGAAAAGGGCTATACAGAAATTAGTCGAAGATAGCATCTCCGAAGAAATA
TTGAAGAAGAACTTGCTGCCCGGGGATAAGATACTGGTAGATGCTGTGGAAGGGCAAATCATAGCTCGGAAAGCGAGTGA
AAAGTAG

Protein sequence :
MFRRFTQRARNAVIHAQEEARQLNHPAIGTEHILLGLLREGEGVGARALLNSGIDLEKVREEINRVIGANGEAVEKPAGD
LPVTPRAKKVFNLAFDEARLQGVNYVGTEHLLLAVLREEEGVAGQVLHSMGVKLDQIREQVMLLLGGDVSSTYHNPNAYQ
DTASQPNQQARKRARSKTPTLDSFSRDLTQDASEGRLDPVIGRNNEIERVIQILSRRTKNNPVLIGDPGVGKTAIVEGLA
QRIMDNQIPEILSNKRVVALDLSAMVAGTKYRGEFEERLTRIVNEIKSSGDVIVFIDELHTIVGAGAAEGAIDAANILKP
SLARGEFQCVGATTLNEYRKHVEKDAALERRFQPILVEEPSIEESIEILKGLRDRYEAHHGVKIGDEAIEAAAKLSARYI
SDRFLPDKAIDLIDEASSRVRLANYIIPEDLKKKESQLEDLIKEKEEAINGQEYEKAARLRDEEQKLRDEIENERKEWSS
QRSLNAGSVGEDEIAAVVSSWSGIPVNKLAEEESERLVQMEDVLHQRVIGQEEAVKAVSRAVRRARAGLKNPKRPIGSFV
FLGPTGVGKTELARSLAEAMFGSEDAIIRLDMSEYMEKHAVSRMIGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKA
HPDVFNILLQVMEDGRLTDGQGRTVDFRNTVVIMTSNVGADSIKNSKKVGFTRAIDEAHDYSQMKERVMEQLKHTFKPEF
MNRIDEIIVFQNLNEQELKEIVDLLLLDLKERVKENGYGMEISPAARELILKEGYDPAFGARPLKRAIQKLVEDSISEEI
LKKNLLPGDKILVDAVEGQIIARKASEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swol_2367 YP_755027.1 ATPase VFG0079 Protein 0.0 62
Swol_2367 YP_755027.1 ATPase VFG0080 Protein 1e-139 51