Gene Information

Name : Swol_2040 (Swol_2040)
Accession : YP_754705.1
Strain : Syntrophomonas wolfei Goettingen
Genome accession: NC_008346
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 2337264 - 2339012 bp
Length : 1749 bp
Strand : -
Note : KEGG: tte:TTE1815 pyruvate kinase

DNA sequence :
ATGAGAAAAACCAAGATTATATGCACCATTGGCCCGGCCAGCGAGCAGATTGAGAACTTACTGCTTATGATAGAGGCCGG
CATGAATATCACCCGCCTTAATTTTTCCCATGGGAGCTATGAAGAGCACCAGAAGAGAATTGCCAACATTCGCGAGGCCC
GTAAGAAGGCGGGAGTACCAGTGGCTATAATGCTGGATACCAAAGGACCGGAGATAAGAACCGGTCTTCTTAAGGCTGGA
AAGGTGAAGCTGGAAGCCGGGCAGCGTTTTGTGCTAACCACCCGCCAAGTAGAAGGAGATGAAAACCTGGTACAGGTCAC
TTATGATCGCCTGCCCCAGGAGGTGGAAAAGGGCAATAGCATACTGCTGGCTGATGGCTTGATTAACCTGCAGGTGCTGG
AGACCAGCGATACAGACATTATCTGCGAGGTGGTCAATGGTGGGGAACTGGGAGAGAGAAAAGGAATCAATGTGCCCGGA
GCTCGTATAAACATGCCTTTCCTCAGTGAAAAAGATAAAGAGGATATAAACTTTGGCATAGAGCAAGAAGTTGATTTCAT
TGCCGCTTCCTTTGTGCGCACAGCGGATGATGTGCTGGAAATAAGGCGTCTTTTGGAGCGGCGGGATGCCGACATAGATA
TAATAGCCAAGATTGAAAGCCAGCAAGGGGTAGAAAACCTGGAAGACATTATCAAAGTAGCTGATGGAATAATGGTAGCC
AGAGGGGATTTGGGAGTGGAGATACCGGCGGAGGAAGTACCGCTGGTGCAAAAAAACATTATAGAGAAATGCAGTCCCCG
GGGAAAGATGGTGATCATCGCCACCCAGATGCTGGATTCCATGATCGTAAACCCCCGGCCCACACGGGCGGAAGTATCTG
ATGTAGCCAATGCTATTTTTGATGGTGCCGATGCCATCATGCTTTCAGGAGAAACAGCCGCCGGGAAATATCCGGTTGAG
GTGGTCAAGACCATGGCCCGCATAGCCGGGCGGGCGGAAGAAGTATTGCCTTACCAGGAAATTTTGCGGCAGAGGAGACT
GCAAGGAGAGCTGTCCATAACGGATGCTATCAGCTTTGCCACCTGTGCCACCGCCCTGAATTTGAACGCCTCGGCCATAA
TTACTCCAACCGTAACCGGTCTTACCGCCAAGATGGTAGCCAAATACCGGCCCCAGGCCAGTGTTGTTGCCGTTACCACT
GAAGAGCGGATATTGAACAAGCTGGCTCTGGTGTGGGGCGTCTACCCCCTCTTGATTCCTGAAACCTCAGGCACTGATGA
ATTATTCGAAGAATCGATAAAAGCTGCCTTAGAGTCTGCCTATATTAACAACGGAGACCTGGTGATATTGACTGCCGGAG
TGCCCATCGGTTCCCCGGGAGGCACCAATCTTTTAAAGGTTCATGTTGTAGGCCGGATACTGGCCCAAGGCATGGGCATA
GGCAAAGACCCGGTTACCGGGCGGGTAAGAATAGTAGTTTATCCGGAAGACATGGAAAAGATTAAAGACGGGGATATCGT
TGTAACCACCAGTGCCGACTGTGCCCTGGCCCCCCACCTGCCCAGAATTGCCGCCCTGGTAGCGGAGGAAGGAGGCCTGA
CCTCCAATGCGGCTATTATGGGTTTGAATGCTAACATTCCCGTCATTGTAGGAGCCAGAAACGCCACCGGCCTATTGGAG
GACGATATGCTGGTCACCCTGGATACCCCTCATGGCCGGGTCTACCAGGGAATTGCCCGAGTACGCTAA

Protein sequence :
MRKTKIICTIGPASEQIENLLLMIEAGMNITRLNFSHGSYEEHQKRIANIREARKKAGVPVAIMLDTKGPEIRTGLLKAG
KVKLEAGQRFVLTTRQVEGDENLVQVTYDRLPQEVEKGNSILLADGLINLQVLETSDTDIICEVVNGGELGERKGINVPG
ARINMPFLSEKDKEDINFGIEQEVDFIAASFVRTADDVLEIRRLLERRDADIDIIAKIESQQGVENLEDIIKVADGIMVA
RGDLGVEIPAEEVPLVQKNIIEKCSPRGKMVIIATQMLDSMIVNPRPTRAEVSDVANAIFDGADAIMLSGETAAGKYPVE
VVKTMARIAGRAEEVLPYQEILRQRRLQGELSITDAISFATCATALNLNASAIITPTVTGLTAKMVAKYRPQASVVAVTT
EERILNKLALVWGVYPLLIPETSGTDELFEESIKAALESAYINNGDLVILTAGVPIGSPGGTNLLKVHVVGRILAQGMGI
GKDPVTGRVRIVVYPEDMEKIKDGDIVVTTSADCALAPHLPRIAALVAEEGGLTSNAAIMGLNANIPVIVGARNATGLLE
DDMLVTLDTPHGRVYQGIARVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-94 49
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-94 49
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-94 49
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-94 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swol_2040 YP_754705.1 pyruvate kinase VFG0479 Protein 6e-95 49