Gene Information

Name : Swol_1681 (Swol_1681)
Accession : YP_754350.1
Strain : Syntrophomonas wolfei Goettingen
Genome accession: NC_008346
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1909265 - 1909948 bp
Length : 684 bp
Strand : -
Note : KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain

DNA sequence : 
ATGGATTCACTTATTCTGCTGGTAGAGGATGAAAAAAAGATCCGCGATATGCTGTCCAAGCATCTTCGTCAGGAGGGTTT
TAGGGTAGCCCTGGCGGCTGACGGTCTTGAAGCTCTGCAGATTTGGCAGGATATAAAACCGGATTTAATTGTCCTGGATC
TTATGTTGCCTGGTTTGTCAGGCTGGGAAGTAATGAAAAAGATCCGGCAGAAAAATAATACCCCGATCATAGTTTTAACT
GCCCGGGTGGATGAAGTTGACAAATTATTGGGCCTGGAGCTGGGAGCCGATGATTATATTACCAAACCATTCTCACCCCG
GGAACTTGCTCTTCGGATTAAAGCTGTGCTGCGGCGCAGTCGTCCCCATGAGCAGGTTACTAATGTAAGCATTTCCAATC
TATCTATTAATCCAGAGAGGTTGGAGGCTTTAATAGGAGATACTCTTTTAGCTTTAACCCCAACAGAATTTAAAATCCTT
TTGCTGTTGGCGGAGAATCCAGGGCAGGTTTTTTCCCGCCTGCATATTTTAGAACGCGTATTTGGTGATATCTACGAGGG
TTATGAAAGAACTATCGATACTCATATCAGTAATTTGCGCCATAAAATCGAAGCGACCGGGAAAAGCGAAATCAGCATAA
AAACAGTTTATGGCATTGGCTATAAATTAGTTGCAGAGGAATAA

Protein sequence : 
MDSLILLVEDEKKIRDMLSKHLRQEGFRVALAADGLEALQIWQDIKPDLIVLDLMLPGLSGWEVMKKIRQKNNTPIIVLT
ARVDEVDKLLGLELGADDYITKPFSPRELALRIKAVLRRSRPHEQVTNVSISNLSINPERLEALIGDTLLALTPTEFKIL
LLLAENPGQVFSRLHILERVFGDIYEGYERTIDTHISNLRHKIEATGKSEISIKTVYGIGYKLVAEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-35 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swol_1681 YP_754350.1 response regulator receiver protein HE999704.1.gene2815. Protein 3e-42 48
Swol_1681 YP_754350.1 response regulator receiver protein NC_002952.2859905.p0 Protein 9e-40 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_007793.3914279.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_002745.1124361.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_007622.3794472.p0 Protein 9e-40 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_009782.5559369.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_002951.3237708.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_003923.1003749.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_002758.1121668.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_009641.5332272.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_013450.8614421.p0 Protein 1e-39 47
Swol_1681 YP_754350.1 response regulator receiver protein NC_014475.1.orf0.gen Protein 1e-32 45
Swol_1681 YP_754350.1 response regulator receiver protein NC_005054.2598277.p0 Protein 1e-32 45
Swol_1681 YP_754350.1 response regulator receiver protein BAC0533 Protein 5e-34 45
Swol_1681 YP_754350.1 response regulator receiver protein CP000647.1.gene4257. Protein 5e-34 45
Swol_1681 YP_754350.1 response regulator receiver protein CP004022.1.gene3215. Protein 9e-38 45
Swol_1681 YP_754350.1 response regulator receiver protein NC_012469.1.7685629. Protein 8e-36 45
Swol_1681 YP_754350.1 response regulator receiver protein CP001138.1.gene4273. Protein 1e-33 44
Swol_1681 YP_754350.1 response regulator receiver protein NC_012469.1.7686381. Protein 2e-39 44
Swol_1681 YP_754350.1 response regulator receiver protein NC_002695.1.915041.p Protein 3e-33 44
Swol_1681 YP_754350.1 response regulator receiver protein CP000034.1.gene3834. Protein 3e-33 44
Swol_1681 YP_754350.1 response regulator receiver protein CP001918.1.gene3444. Protein 8e-44 44
Swol_1681 YP_754350.1 response regulator receiver protein CP000647.1.gene2531. Protein 1e-43 44
Swol_1681 YP_754350.1 response regulator receiver protein CP001918.1.gene5135. Protein 1e-30 44
Swol_1681 YP_754350.1 response regulator receiver protein AF155139.2.orf0.gene Protein 7e-38 43
Swol_1681 YP_754350.1 response regulator receiver protein CP001138.1.gene2239. Protein 2e-42 43
Swol_1681 YP_754350.1 response regulator receiver protein NC_002695.1.916589.p Protein 1e-43 43
Swol_1681 YP_754350.1 response regulator receiver protein CP000034.1.gene2186. Protein 1e-43 43
Swol_1681 YP_754350.1 response regulator receiver protein BAC0596 Protein 2e-42 43
Swol_1681 YP_754350.1 response regulator receiver protein BAC0039 Protein 1e-43 43
Swol_1681 YP_754350.1 response regulator receiver protein AM180355.1.gene1830. Protein 3e-35 42
Swol_1681 YP_754350.1 response regulator receiver protein CP004022.1.gene1676. Protein 9e-36 42
Swol_1681 YP_754350.1 response regulator receiver protein AE000516.2.gene3505. Protein 8e-32 42
Swol_1681 YP_754350.1 response regulator receiver protein CP000675.2.gene1535. Protein 1e-39 41
Swol_1681 YP_754350.1 response regulator receiver protein NC_010400.5986590.p0 Protein 2e-40 41
Swol_1681 YP_754350.1 response regulator receiver protein NC_011595.7057856.p0 Protein 7e-40 41
Swol_1681 YP_754350.1 response regulator receiver protein NC_010410.6002989.p0 Protein 7e-40 41
Swol_1681 YP_754350.1 response regulator receiver protein FJ349556.1.orf0.gene Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swol_1681 YP_754350.1 response regulator receiver protein VFG1563 Protein 7e-36 42
Swol_1681 YP_754350.1 response regulator receiver protein VFG1702 Protein 9e-36 42