Gene Information

Name : Swol_0128 (Swol_0128)
Accession : YP_752854.1
Strain : Syntrophomonas wolfei Goettingen
Genome accession: NC_008346
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 140787 - 142694 bp
Length : 1908 bp
Strand : +
Note : KEGG: dsy:DSY3347 hypothetical protein

DNA sequence :
ATGACTTATTGGCTTCGTTTAATTCTAATGTTATTATTCGACAGCTGTCTGATAAACCTCTCTATCGGGTTTTCTCTATG
GCTGCGCTTCGAAGGTGAAGGGGGAATCCCCGCCAATTACCTGGAGGCGTTTTTCACCCTGATCCCCTGGTATACCTTTA
TCACCCTGGGAGCTCTGTACGCTATGCGCCTCTATCACCGTATGTGGAAGTATGCCAGCATTGGCGAATTATTTGGGATA
GTAAAGGCAGTCACTACCAGCACCGCTATCGTAATTATACTGATATACACCATACCCCTGTCCTACCTGCCCCGCAGCGT
ATACATAATGTCCTGGGTTTTCATGATTATATTCATTGGCAGCTCCCGTTTGAGCTGGCGCCTGCTGCGGGATCTCATTA
TTAAGGAATCCAATAAAAAAGCTAAAAGAACCTTGATTATCGGGGCTGGCGATGCCGGGGCCATGGTGGCCCGGGAACTT
AATAACAATCAGTCCTTAAACCTGCTTCCAGTAGGTTTTGTAGATGATAGTCCCCTGAAGCAGAAACTCAGTATTTTTGG
CATTCCGGTGCTCGGAAGCCGGGAGCAGATTCCTTTTCTCACCGCCAGCCACGGAATAGAAGAAATTATTATTGCCATGC
CTTCGGCAGAAGGTAGGACCATAAGGGAAATAGTAAATATTTGCCAGGCGACCGGAGTCCGGCTGCGGATATTTGAAGGA
ACCGACGACCTGCTACACAGCCGTAGTAAGATTCGCGATGTCCAACTGGAAGACTTGCTGCGACGCGAGCCGGTTAAACT
TGACCTGGAGGAGATTGCCGCTTACCTGCAGGGTAAAACGGTACTGATCAGCGGAGCGGGCGGCTCCATCGGCTCCGAAC
TCTGCCGGCAGGTCTGCCGGCACCGGCCCCAACGCTTGATACTTTTGGAATGCAGTGAGAACAACCTTTTCGATATAGAC
AATGAACTGCGGGAATCCTTTCCCGAACAGGCTCTGGAAGCAGAGCTTGCTGATGTCCGCAACCGGGAAAAACTCCAGGC
CGTTTTCGAAAAGTATTTTCCCCAGGTTATATTCCATGCCGCTGCTTTCAAGCATGTTCCCATGATGGAAATGCACCCGG
AAGAAGCCTTGAATAATAATGTCCTGGGTACCAGGAACATAGCGGAAATGGCCGACAAATATGGAAGCGAGACTTTTATA
CTGATATCCACCGACAAAGCGGTCAATCCTACCAATGTCATGGGGGCCAGCAAGCGTATAGCCGAGTTGATTGTGAAGGA
TATAAACCGCAGCAGCCAGACCCGCTTTGCTGCTGTACGCTTCGGTAATGTGTTGGGCAGTCGCGGCAGCGTAGTCCCCA
TTTTTCTAAAGCAGATTCAAAAAGGGGGGCCGCTTACCGTAACCCACCCTGATATGACCCGCTACTTTATGACCATACCC
GAAGCAGTAGAGCTGGTTATTCAAGCCGGAGCCATTGCCCGGGGGGGAGAGATCTTTGTGCTCGATATGGGAGAACCGGT
AAAGATAGCGGACCTGGCCAACGACTTAATCAGGTTGTCAGGCTATGACCCGGAACTAGACATTGAAATTAAATACACCG
GCATAAGGCCGGGAGAGAAGCTTTACGAAGAACTCTTTTCCGGCTATGAAGAAATGGCTGCCACCCGGCACCAGCGCATC
TTCATTTCCACCAAAGAACTGGATGAGCGTTACAACGGGATAAAAAACAATATTACTGCCTGGATAAATAATCTATCCCC
CGAGAGAAACGAGATAATACGGTTCATCCAGGAACTCATCCCGGAATACTGCGGGAGCGAAGCAAATGAAGAACCTGTTC
CCCGGGGAGAAGTAATTTATTTAGAAAAAAGAGGCAACCGGATAAAAAAAAGCAGCGGGATTAAATAG

Protein sequence :
MTYWLRLILMLLFDSCLINLSIGFSLWLRFEGEGGIPANYLEAFFTLIPWYTFITLGALYAMRLYHRMWKYASIGELFGI
VKAVTTSTAIVIILIYTIPLSYLPRSVYIMSWVFMIIFIGSSRLSWRLLRDLIIKESNKKAKRTLIIGAGDAGAMVAREL
NNNQSLNLLPVGFVDDSPLKQKLSIFGIPVLGSREQIPFLTASHGIEEIIIAMPSAEGRTIREIVNICQATGVRLRIFEG
TDDLLHSRSKIRDVQLEDLLRREPVKLDLEEIAAYLQGKTVLISGAGGSIGSELCRQVCRHRPQRLILLECSENNLFDID
NELRESFPEQALEAELADVRNREKLQAVFEKYFPQVIFHAAAFKHVPMMEMHPEEALNNNVLGTRNIAEMADKYGSETFI
LISTDKAVNPTNVMGASKRIAELIVKDINRSSQTRFAAVRFGNVLGSRGSVVPIFLKQIQKGGPLTVTHPDMTRYFMTIP
EAVELVIQAGAIARGGEIFVLDMGEPVKIADLANDLIRLSGYDPELDIEIKYTGIRPGEKLYEELFSGYEEMAATRHQRI
FISTKELDERYNGIKNNITAWINNLSPERNEIIRFIQELIPEYCGSEANEEPVPRGEVIYLEKRGNRIKKSSGIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-104 48
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-97 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swol_0128 YP_752854.1 hypothetical protein VFG1300 Protein 2e-97 46