Gene Information

Name : pbpG (Sfri_0851)
Accession : YP_749542.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : D-alanyl-D-alanine endopeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 999830 - 1000738 bp
Length : 909 bp
Strand : +
Note : specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7

DNA sequence :
ATGAAATTTCGTTTCTTGTTTGCCTGTGCCTTATTATGTTCAACTTCGTTGAGCAGCCCAATGTCTTTTGCAGCACAAGC
CGTGCAAAACAAACCTCAGCAAGAGTTAGCCTCCGCTAGTGCTATGTTGGTCGACTTAACCACCAATGAAGTTTTATATT
CAAGTAATCCAAATCAACCAGTGCCTATAGCGTCAGTGACCAAGTTAATGGCTGCCATGGTGACATTGGATGCCAAGCTT
GCATTAGATGAAAAAATCTCAGTAAAAATTACTGACTCACCTGTGATGCGCAATATTTATTCACGTGTGCGTTTAGGCAG
CGTGGTGACCCGTGAAACCATGTTGTTATTAACATTAATGTCGTCAGAAAATCGTGCAGCAACCTCACTTGCACATAATT
ATCCAGGTGGATTTAAGGCTTTTGTGCGAGCAATGAACGACAAAGCGACCGCACTGGGCATGAGCCAAACACGTTATGTT
GAACCAACAGGCTTGTCACCTGACAATGTATCTAGCGCTAACGATCTCATATTATTGCTTAAAGCCAGCCAAACATATCC
GTTATTAGGCAAGCTGAGCTCGACCACTAAAAAGCACGTTAACTTTGAATCACCACGTTATGCCTTAGATTTTCAAAACA
CTAATAAACTAGTATTTAAAAACAATTGGAATATTGCATTAACCAAAACAGGCTTTACCAATAAAGCGGGCCATTGTTTA
GTGATGTTAACTGAAATGAACAAGCGTAAAGTGGCATTTGTGGTACTGGACTCATTTGGTAAATACACCCACATGGCTGA
TGCCAACCGATTAAAGAACTGGCTAGAGACTGGGCGTACAACACCAATCCCTGCATCGGCTAAAGCCTATAAAAAACAAC
GTCAAGCGATTCTGAATAACAGTATTTAA

Protein sequence :
MKFRFLFACALLCSTSLSSPMSFAAQAVQNKPQQELASASAMLVDLTTNEVLYSSNPNQPVPIASVTKLMAAMVTLDAKL
ALDEKISVKITDSPVMRNIYSRVRLGSVVTRETMLLLTLMSSENRAATSLAHNYPGGFKAFVRAMNDKATALGMSQTRYV
EPTGLSPDNVSSANDLILLLKASQTYPLLGKLSSTTKKHVNFESPRYALDFQNTNKLVFKNNWNIALTKTGFTNKAGHCL
VMLTEMNKRKVAFVVLDSFGKYTHMADANRLKNWLETGRTTPIPASAKAYKKQRQAILNNSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 4e-41 43
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 4e-41 43