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Name : Sfri_0791 (Sfri_0791) Accession : YP_749484.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Virulence Product : UspA domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0589 EC number : - Position : 927858 - 928715 bp Length : 858 bp Strand : + Note : PFAM: UspA domain protein; KEGG: plt:Plut_0944 UspA-related nucleotide-binding protein DNA sequence : ATGATGACAAATGTGATTGCCTGTATCGACGGTTCAAAAGCAACACGCGCGGTATCTGATGCTAGTGGGTGGGCGGCTAT GCAGTTGAACGCCCCTGTGACGTTATTACATGTATTGGATAAGTCTGCCTATCCTACAGAGTTAAATCTGTCGGGAAATA TTGGCCTTGGTAGCCGAGAGCATTTACTTGCTGAGATGGTTGAACTTGAAGGGCGCATGAGTAAACTCGCGCTCGAACAA GGTAAATATATGCTACAAGATGCTCAAACGAGCATTGTAGCGGCGCAACCTACTGTGACGGTGCAAACACTGCAGCGCCA TGGGGATTTAGTGGAAACGCTGCTTGAGCAAGAAGCTGATGCCAGACTGGTGGTTATTGGTCGTCAAGGTGAGCAGCATC AAGATCAAGCGCAAGCGATTGGCAGTCATTTAGAAAGTGTTATTCGCACGCTTAAGCAGCCGATTTTAGTGGTGATGCCT GAGTTTGCAATGCCAAGCCGTTTTATGATCGCTTATGATGGCAGCGCCACCTCGAAAACAGTGCTTGAACGAGTGATTAG CAGCCCACTACTTAAAGGGCTCGGATGTCATTTAGTGATGGTGTCTGACAATCAGTCTCAAGCGCTAACCGAATTGACCT CGGTTGCAGACTCTCTTACTGAAGCTGGTTTTGAGGTAACAACTGCGGTTTGTCAGGGCGAAGTGCAAACTGCTCTTGAA GCTTACCAGCTAGCACACCAAATTGATTTAATGGTAATGGGTGCTTATGGTCATTCACGTATTCGTGAGTTTTTTGTTGG TAGTAACACGACACGGATGATCAGTAAAAGCCACATCCCATTGTTATTGTTACGCTAA Protein sequence : MMTNVIACIDGSKATRAVSDASGWAAMQLNAPVTLLHVLDKSAYPTELNLSGNIGLGSREHLLAEMVELEGRMSKLALEQ GKYMLQDAQTSIVAAQPTVTVQTLQRHGDLVETLLEQEADARLVVIGRQGEQHQDQAQAIGSHLESVIRTLKQPILVVMP EFAMPSRFMIAYDGSATSKTVLERVISSPLLKGLGCHLVMVSDNQSQALTELTSVADSLTEAGFEVTTAVCQGEVQTALE AYQLAHQIDLMVMGAYGHSRIREFFVGSNTTRMISKSHIPLLLLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| uspA | AFV47946.1 | universal stress protein A | Virulence | AbaR25 | Protein | 3e-62 | 45 |
| ABZJ_00238 | YP_005524194.1 | Universal stress protein | Not tested | AbaR22 | Protein | 4e-62 | 45 |
| uspA | AFV47966.1 | universal stress protein A | Virulence | AbaR25 | Protein | 3e-62 | 45 |
| ABZJ_00257 | YP_005524213.1 | Universal stress protein | Not tested | AbaR22 | Protein | 4e-62 | 45 |
| uspA | AFV47977.1 | universal stress protein A | Virulence | delta-AbaR25 | Protein | 3e-62 | 45 |
| ABTW07_3868 | YP_005797116.1 | universal stress protein | Not tested | AbaR4e | Protein | 4e-62 | 45 |
| ABK1_0239 | YP_005512811.1 | Universal stress protein | Not tested | AbaR4d | Protein | 4e-62 | 45 |
| uspA | AFV47994.1 | universal stress protein A | Virulence | delta-AbaR25 | Protein | 3e-62 | 45 |
| ABTW07_3909 | YP_005797157.1 | universal stress protein | Not tested | AbaR4e | Protein | 4e-62 | 45 |
| BJAB07104_00258 | YP_008207723.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR25 | Protein | 4e-62 | 45 |
| uspA | AEO37451.1 | universal stress protein A | Not tested | AbaR4 | Protein | 4e-62 | 45 |
| BJAB07104_00274 | YP_008207739.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR25 | Protein | 4e-62 | 45 |
| uspA | AEQ20902.1 | universal stress protein A | Not tested | Tn6166 | Protein | 4e-62 | 45 |
| uspA | AEZ06029.1 | universal stress protein A | Not tested | Tn6167 | Protein | 4e-62 | 45 |
| BJAB0868_00262 | YP_008211588.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR26 | Protein | 4e-62 | 45 |
| uspA | AFH57199.1 | universal stress protein | Virulence | AbaR4a | Protein | 3e-62 | 45 |
| BJAB0868_00278 | YP_008211604.1 | Universal stress protein UspA-related nucleotide-binding protein | Not tested | AbaR26 | Protein | 4e-62 | 45 |
