Gene Information

Name : Sfri_0068 (Sfri_0068)
Accession : YP_748769.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5006
EC number : -
Position : 81492 - 82361 bp
Length : 870 bp
Strand : +
Note : PFAM: protein of unknown function DUF6, transmembrane; KEGG: pha:PSHAb0256 transporter involved in threonine and homoserine efflux

DNA sequence :
ATGCAAATCAATCGTGTACTTCTGACCGCTGTCGGCAGTGTTTTGCTGGCAATGGTGACCATTCAATCAGGTGCTTCTTT
AGCAAAGCAACTTTTTCCCTTGGTTGGGCCGGAAGGCACTACAGCATTACGTTTAGGTTTTGCCGCGGCCGTACTTTGGA
TGGTGTTTCGTCCATGGAGAGCCTTACCCCAAGGCCGAGATTGGCAGAGTATTATTATTTATGGTTTGTGTTTAGGTGGG
ATGAATATTCTGTTTTATTTAGCCATTGAACGTATCCCATTAGGGATTGCGGTTGCGCTAGAGTTCACTGGTCCTTTAGC
GGTGGCATTGTTTGGGTCTAAACGGAAAAGTGATTTGTTTTGGGTTGCTTGTGCGATAGCGGGTATTTTGCTTCTTATGC
CAAGCTTGTCTAGTACACAAGGCCTCGATTTAGTCGGGGCATTAATGGCGTTGGGGGCGGGAGCATGTTGGGCTGGATAC
ATTTTATTTGGCACCCGTACTGGTAAGCAGGCATCAGGCGGTATTACGGTTGCTCTCGGGATGACTGTTGCTGCAGTGGT
GTTAGTGCCTGTAGGCGCCGTTAGCCAAGGTTTGGCGTTACTTAGCTGGGAAGTCTTGCCGCTTGGCTTATTGGTTGGGG
TGTTATCGAGTGCATTACCATACTCGTTGGAAATGATAGCCCTTAGAAACATGCCAACACAGGCCTTTAGCGTGCTAATG
AGTCTAGAACCTGCCATCGCCGCATTGGCTGGTTTTGTTATTTTAAGTGAGCAATTAACCATGCTGCAGTGGTCTGCCAT
TGGTTTAGTGATTATTGCCTCAATTGGCAGTAGTTTTACGCCTAAGAAAGCCATTGAAATGGGCGTGTAA

Protein sequence :
MQINRVLLTAVGSVLLAMVTIQSGASLAKQLFPLVGPEGTTALRLGFAAAVLWMVFRPWRALPQGRDWQSIIIYGLCLGG
MNILFYLAIERIPLGIAVALEFTGPLAVALFGSKRKSDLFWVACAIAGILLLMPSLSSTQGLDLVGALMALGAGACWAGY
ILFGTRTGKQASGGITVALGMTVAAVVLVPVGAVSQGLALLSWEVLPLGLLVGVLSSALPYSLEMIALRNMPTQAFSVLM
SLEPAIAALAGFVILSEQLTMLQWSAIGLVIIASIGSSFTPKKAIEMGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0589 NP_938965.1 hypothetical protein Not tested Not named Protein 1e-21 41