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Name : Sfri_0669 (Sfri_0669) Accession : YP_749367.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 780641 - 783238 bp Length : 2598 bp Strand : + Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: son:SO3577 clpB protein DNA sequence : ATGTATCAGATCCTAGGAGGTTGTATGAGACTCGATCGTATGACTAATAAGTTTCAAATTGCCATTTCTGATGCCCAATC ATTAGCATTGGGACGCGATCATCAATTTATTGAACCTATTCATTTAATGATGGCGCTGTTAAATCAAGATTCTGGTTCTA TCCATTCTTTACTTACGCAAGCGGGCATTCGTGTTAGCGCGCTTCGCTCTGCGGTTAGCCAAGAGTTGGAGCGTTTTCCA CAAGTTGAAGGTACTGGTGGTGATGTTCAGTTATCACAAGGGTTAATTCGTTTACTAAACCTATGCGATAAGTTAGCGCA AAAGCGCAAAGACAAATACATTTCATCTGAATTGTTTGTCTTGGCTGCATTGGAAAATAATGACCCCCTTGCCAAAGCAT TAAAAGATTCTGGTGCAAGCAAAGAGTTAATGGAAAAAACCATTGAAGACATGCGTGGCGGGCAGAAAGTTGATGATCCC AATGCTGAAGATCAACGCCAAGCATTGAAAAAATTTACCGTAGATTTAACCGAGCGCGCAGAGCAAGGTAAGTTAGACCC TGTTATTGGTCGTGATGAGGAAATTCGTCGCACGATTCAAGTGCTACAACGCCGTACTAAAAATAATCCGGTATTAATTG GTGAACCTGGTGTCGGTAAAACCGCCATTGTTGAAGGTTTAGCTCAGCGTATTGTTAATGGTGAAGTCCCTGAAGGGATT AAAAATAAACGGGTATTGTCATTAGACATGGGGTCGTTAATTGCGGGAGCCAAATATCGCGGTGAGTTCGAAGAACGCTT AAAAGCAGTATTAAATGAGCTATCACAAGAAGAAGGTCAGGTCATTCTGTTTATTGATGAGCTGCATACCATGGTCGGCG CAGGTAAGGGCGAGGGCGCAATGGATGCTGGTAATATGCTTAAGCCTGCTTTAGCACGTGGTGATTTGCATTGTGTCGGC GCAACAACACTTGATGAATATCGTCAATATATTGAGAAAGATGCTGCACTTGAACGCCGTTTTCAAAAAGTAATTGTTGA TGAACCGAGCGTTGAAGACACCATTGCCATTTTACGTGGTTTAAAAGAGCGTTACGAATTACATCATCATGTTGAAATAA CTGATCCTGCTATTGTTGCAGCTGCAACCATGTCGCATCGTTATATTTCAGACCGTAAACTGCCTGACAAAGCTATCGAC TTAATTGATGAAGCCGCATCGAGTATCAGGATGCAGATTGATTCTAAGCCCGAAGTACTTGATCGATTAGAGCGCCGTGC TATTCAGCTTAAGCTGGAAGAACAAGCGTTAAGTAAAGAGTCAGACGAAGCCAGTCGTAAACGTCTTGAGTTTTTACAAC ATGAACTGAGAGATGTTGAAAGTAAAGCGGCTGAAATGAATGAGATTTGGCATACCGAGAAAGCAGCATTAGCAGGTACT CAACATATTAAAGCTGATCTCGAACAGGCGAGAATGGATTTAGAAGTTGCTCGACGTGCTGGTGACTTAACGCGGATGTC TGAATTACAGTATGGGCGTATTCCTGAACTTGAAAAACAGTTGGATTTAGCATCACAAGCCGAAATGCAAGATATGACAC TGTTACGTAATAAAGTGACTGATGTCGAGATTGCAGAAGTACTATCGAAAGCGACGGGGATACCTGTTTCAAAAATGCTC GAAGGCGAACGTGAAAAACTATTGCATATGGAAACCGCATTACATGAACGTGTAATTGGCCAAAACGAGGCTGTGGATGC AGTATCTAATGCCATTCGCCGTAGCCGCGCCGGTCTTGCCGATCCGCAACGTCCAATCGGTTCGTTCTTGTTCCTCGGGC CTACTGGTGTGGGTAAAACTGAATTATGTAAATCGCTAGCTAAGTTTTTATTTGATTCAGAATCGGCTCTTGTGCGCATT GATATGTCTGAATTTATGGAAAAACATACCGTTTCGCGTTTAGTTGGTGCCCCTCCAGGATATGTGGGTTATGAAGAAGG TGGTTATTTAACTGAAGCGGTTCGCCGTAAGCCTTACTCAGTGATTTTGTTAGACGAAGTTGAGAAGGCACATCCAGATG TATTTAACGTGTTGTTGCAAGTATTAGATGATGGCCGTTTAACAGATGGCCAAGGCAGAACGGTTGATTTTAAAAACACT GTGATCATCATGACCTCTAACCTTGGTTCAGATATTATCCAAGAGGGCTTTGGTCATACGAGTTATGAAGAGATGAAAGC TGGAGTCATGAATGTTGTGACGCAAAGCTTCCGTCCAGAGTTTTTGAATCGAATTGATGAGTCTGTGGTATTCCATCCCT TAGATGCAGAAAATATCAAACACATTGCCAGCATTCAATTTGAATTGTTGCGCAAGCGTCTTATTGAGAAAGAGTTTGAT ATTGAGTTGTCTGATGCCGCTTTATCATTAATTGCCGAAGCTGGATTCGATCCTGTTTATGGTGCAAGGCCTTTAAAACG AGCATTGCAACAAGAAGTGGAGAATCCTTTAGCCCAAAAATTACTTCGAGGCCAATTATTGCCAGGTAAAATGATTAAAG TTGTAGTAGAAGATGGCAAGCTAGCTTTCAATCAATAA Protein sequence : MYQILGGCMRLDRMTNKFQIAISDAQSLALGRDHQFIEPIHLMMALLNQDSGSIHSLLTQAGIRVSALRSAVSQELERFP QVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFVLAALENNDPLAKALKDSGASKELMEKTIEDMRGGQKVDDP NAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGI KNKRVLSLDMGSLIAGAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVG ATTLDEYRQYIEKDAALERRFQKVIVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYISDRKLPDKAID LIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKESDEASRKRLEFLQHELRDVESKAAEMNEIWHTEKAALAGT QHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDVEIAEVLSKATGIPVSKML EGEREKLLHMETALHERVIGQNEAVDAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSLAKFLFDSESALVRI DMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNT VIIMTSNLGSDIIQEGFGHTSYEEMKAGVMNVVTQSFRPEFLNRIDESVVFHPLDAENIKHIASIQFELLRKRLIEKEFD IELSDAALSLIAEAGFDPVYGARPLKRALQQEVENPLAQKLLRGQLLPGKMIKVVVEDGKLAFNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-162 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfri_0669 | YP_749367.1 | ATPase | VFG0079 | Protein | 4e-134 | 42 |
