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Name : Sfri_0647 (Sfri_0647) Accession : YP_749345.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 749965 - 752007 bp Length : 2043 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGGCTTCACAATTGCCCGTTAGACCTTACAAACAAGCAGGAGAGAGCATGTCATCTCGTAAAGTACTCGCTAACGCTAT TCGCGCCCTAAGTATGGATGCGGTTCAAAAAGCCAATTCTGGTCATCCAGGTGCCCCAATGGGGATGGCTGATATCGCCG AAGTGCTATGGAATGATTTTCTAAAGCACAATCCAACTAATCCTAACTGGGTCGATCGCGATCGTTTTGTTCTGTCAAAC GGTCATGGCTCTATGCTTATCTACTCTTTACTGCATTTATCTGGTTATGAATTGCCTATCGAAGAGCTAAAGCAATTCCG TCAGTTGCATTCTAAAACACCTGGTCATCCTGAATATGGTTATACCCCTGGTGTTGAAACCACAACGGGTCCTTTAGGTG CTGGTATCAGTAACGCAGTTGGTATGGCGATTGCTGAAAAAACCTTAGCGGCTCAGTTTAACCGTCCTGGACACGACATT GTGGATCACTTCACATACTGTTTCTTAGGCGATGGTTGTTTAATGGAAGGGATTTCTCACGAAGTCAGTTCATTAGCTGG AACATTAGGCCTTGGTAAGTTAGTGGCATTTTGGGATGACAACGGTATTTCTATCGATGGTCATGTTGAAGGTTGGTTCA CTGACGATACTCCTAAGCGTTTTGAAGCCTATGGCTGGCATGTTGTTGCTGATGTAGATGGTCATAATCCAGATGCTATC CGTGCAGCAATTGAAGAAGCTAAATCTGTAACAGATAAGCCATCAATGATTTGCTGTAAAACCATTATTGGTTTTGGTTC GCCTAACAAATCGGGTAGCCATGATTGTCATGGTGCACCATTAGGTGATGCTGAAATTGCAGCAGCTCGTGAGTTCTTAA ACTGGCCACACGCTCCTTTTGAAATCCCATCTGATGTGTATGCTGGTTGGGATGCAAAACATAAAGGTGTTGCTAACGAG TCATTATGGAATGACAAGTTTTCGGCTTACCAAGCAGCGTTCCCAGAACTTGCTGCAGAATATGAACGTCGCGTATTAAA AGGTGATTTACCAGCTGATTTTGAAGCTAAAGCACAAACCTTTATTCAAGAAAGCCAAGATAAAGCCGAAGGTATTGCGA GCCGTAAAGCGTCTCAAAATGCCATTGGTTTCTTTGGTGCTATGTTGCCTGAATTACTTGGTGGTAGCGCAGACTTAGCC GGCTCTAACTTAACGCTTTGGTCTGGTTCAAAAGGTATTCAAGACGATCCTGCCGGTAACTACATCTATTACGGTGTTCG TGAATTCGGTATGAGCGGTATTATGAACGGCGCGTCGTTACATGGTGGTTTTATTAACTATGGCGCAACCTTCATGATGT TCATGGAGTACGCACGTAACGCGGTACGTATGTCAGCATTAATGGGCATTCAAAACATTTTCGTTTATACCCATGACTCT ATTGGTCAAGGCGAAGATGGCCCTACTCATCAGCCGGTTGAGCAATTAGCTAACTTACGTTTAACGCCTAATATGGCAGT ATGGCGTCCATGTGATGCAGCGGAAACTGCTGTATCTTGGAAAGCGGCCATTGAACGTCGTGATGCACCTACATCATTAA TCTTTAGTCGTCAGGGTCTTAAAGCCCAAGCGCGTACCGCTGAGCAATTAGCTAACGTAGCTAAAGGTGGTTATGTACTG TCTGATTGCCAAGGCACTGCTGATGTGATTTTGATTGCAACAGGTTCAGAAGTGCAATTAGCTATGGATTCTGCAGTAGA GCTAACCAAACTAGGTCAAAAAGTACGGGTAGTGTCTATGCCTTCTACTACCGAGTTTGATAAGCAAGATGCAGCATATA AAGAATCGGTACTACCAAAAGGAGTCACTAAACGTGTTGCTGTTGAAGCGGCACACGCTGACTTCTGGTACAAATATATT GGTTTTGATGGTGCTGTAGTGGGTATGACCACCTTTGGTGAGTCTGCTCCTGGTGGTGATTTACTTAAACATTTCGGCTT CACTGTTGATAATGTAGTAAAAACTGTCCAATCTTTAGGATAA Protein sequence : MASQLPVRPYKQAGESMSSRKVLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTNPNWVDRDRFVLSN GHGSMLIYSLLHLSGYELPIEELKQFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNRPGHDI VDHFTYCFLGDGCLMEGISHEVSSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDDTPKRFEAYGWHVVADVDGHNPDAI RAAIEEAKSVTDKPSMICCKTIIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLNWPHAPFEIPSDVYAGWDAKHKGVANE SLWNDKFSAYQAAFPELAAEYERRVLKGDLPADFEAKAQTFIQESQDKAEGIASRKASQNAIGFFGAMLPELLGGSADLA GSNLTLWSGSKGIQDDPAGNYIYYGVREFGMSGIMNGASLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDS IGQGEDGPTHQPVEQLANLRLTPNMAVWRPCDAAETAVSWKAAIERRDAPTSLIFSRQGLKAQARTAEQLANVAKGGYVL SDCQGTADVILIATGSEVQLAMDSAVELTKLGQKVRVVSMPSTTEFDKQDAAYKESVLPKGVTKRVAVEAAHADFWYKYI GFDGAVVGMTTFGESAPGGDLLKHFGFTVDNVVKTVQSLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 71 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 66 |
