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Name : Sfri_0563 (Sfri_0563) Accession : YP_749262.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 651700 - 653160 bp Length : 1461 bp Strand : + Note : PFAM: Catalase domain protein; KEGG: son:SO1070 catalase DNA sequence : ATGAATCAAACTAACTATTTAACTAGCCAAAATGGCGCACCAGTAGCAGACGACCAAAACTCAATGTCAGCTGGTGAGCG TGGACCACTGCTTTTACAAGATTGGCATTTAATTGAGAAGCTTGCTCATTTTAACCGTGAACGTATTCCAGAGCGTGTTG TGCATGCTAAAGGAACCGGTGTATACGGTACATTTACACTAACTAAAGATTTAAGTGAATTTACCATAGCGGATCATTTT AATGGTGTAGGCAAGCAGACTGAAACATTCATGCGATTCTCTACGGTAGGCGGAGAGATGGGCTCAGCTGATGCAGAGCG TGATCCACGCGGTTTTGGGCTACGTTTTTATACTGCTCGTGGTAATCATGATATTGTCGGTAATAACACGCCAACATTCT TTATCCGTGATGGTATTAAGTTTCCTGACTTTATTCATACCCAAAAACGTCACCCACAAACTAATTTGAAAGATCCCCAA GCAATGTGGGACTTCTGGGCACTCAATCCAGAGTCGATGCATCAAGTGACTATTTTGATGTCAGACCGTGGTATTCCGGC TAACTACAGACAAATGCACGGTTACGGTTCGCATACGTTTTCGTTCTGGAATGCTCAGGGGGAACGTTTTTGGGTTAAGT TTCACTTTAAATCACAGCAAGGCGTGGTGAATTTAACCGGCGAACAAGCAGATATATTAAAAGGGATAGATCCTGATTCA TCACAACGCGACATGGTGGCAGCAATTAATGATGCTAACTTTCCGCGCTGGACTGTAAATGTACAGATTATGCCAGAAGC TGATGCCAATACTTACGCCATTAATCCTTTTGATTTGACTAAAGTATGGCCGCACAGTGATTATCCGTTGATTGAAGTGG GTGAACTTGAGCTAAACCGCTTACCACAAAACTACTTTGCTGAAGTTGAACAAGTGGCATTAGCACCAAGTAACTTAGTG CCCGGTGTGGGTGCATCGCCAGACAAAATGCTGCAAGCACGTTTGTTTTCATATGCAGATGCTCAGCGTTACCGTATTGG TACTAACTACAATCAGTTACCGGTTAACTGTCCGCATGCCGCTAAAGCCAACCATCATCAACGTGCTGGTGCTATGGCAG GAGCTCAGTGTTCTTATCAAGGTAGCCAAACCGGTGGTGATGCCAGTGTTAATTATGGTCCTAACAGCGTTGCACCACTC ACTGAAAATGCAAGTTTTGCAGAACCACCGTTACGTTTAGCAGGAGAGGTTGCACGTTTTAGTCGTTATAACCAAGATGA CTTTACCCAAGCTGGTAACCTATATCGTATCTTTAGTGAAGCAGAGAAAAATCGTTTAGTGGAAACGATTGCGGGCACAC TCAGTCAAACGACCTTAGATGTGCAACAAAAAATGGTGGATCATTTTACTAAAGCGGATGTTGATTACGGTCGACGTGTT AAGCAGGCTTTGGCAAAGTAA Protein sequence : MNQTNYLTSQNGAPVADDQNSMSAGERGPLLLQDWHLIEKLAHFNRERIPERVVHAKGTGVYGTFTLTKDLSEFTIADHF NGVGKQTETFMRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFIRDGIKFPDFIHTQKRHPQTNLKDPQ AMWDFWALNPESMHQVTILMSDRGIPANYRQMHGYGSHTFSFWNAQGERFWVKFHFKSQQGVVNLTGEQADILKGIDPDS SQRDMVAAINDANFPRWTVNVQIMPEADANTYAINPFDLTKVWPHSDYPLIEVGELELNRLPQNYFAEVEQVALAPSNLV PGVGASPDKMLQARLFSYADAQRYRIGTNYNQLPVNCPHAAKANHHQRAGAMAGAQCSYQGSQTGGDASVNYGPNSVAPL TENASFAEPPLRLAGEVARFSRYNQDDFTQAGNLYRIFSEAEKNRLVETIAGTLSQTTLDVQQKMVDHFTKADVDYGRRV KQALAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 9e-124 | 54 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 6e-101 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-99 | 47 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-99 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-99 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-99 | 47 |
