|
Name : Sfri_0485 (Sfri_0485) Accession : YP_749185.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 551424 - 552158 bp Length : 735 bp Strand : - Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sde:Sde_3703 response regulator receiver domain protein (CheY-like) DNA sequence : ATGAATGGAACCGCGAAACATAATGGCCATGTTTGTCCGCAACATATTTTGCTAGTCGAAGACGAACAAGACTTGGCTAA GTTAATCATACTTAACCTCAAAGCACTCAACTACAGCGTCGACCACGCCACCACCTTGAAGCAAGCCATGCACATAATCG AGCATAAAAAGCTCGACCTTATATTAATGGATCGCATGCTCCCCGATGGTGATGGCATTATGCTGTGTGAGCAACTACGC CAAGACGGTAAGGAAGTTCCACTGATGCTACTAACCGCCAAAGATTCAGAAGCAGATGTGGTACTTGGTCTTGAAGCTGG GGCAGATGATTACCTCGTCAAACCTTTTAGCGTATTAGAGCTGCGCGCACGAGTAAAAGCACTATTAAGACGCGGCAAAA CGCAACATGAACAAACACAACAAATTGAATTTAACAGCGTATCCATTAACTCCAGCACCCGTGAAGTTACCGCCTTTAAT AAAGCGTTAACCCTCACCGCCCGCGAGTTTGATTTACTGCTATTTTTAGCCAAACACCCGCAACAAGTCTTTAGCCGCAT GCAACTGCTAGAAGCGGTATGGGGCTATAACTACGATGGCTATGAGCACACTGTAAACAGCCACATCAACCGTTTACGCA ACAAGCTTTCTTTGTGCTCGCCTGAACATGATCTTGTCAAAACCGTGTGGGGCGTAGGCTACAAATTTTCACCACCAGAG GTGCAAGCCCACTAA Protein sequence : MNGTAKHNGHVCPQHILLVEDEQDLAKLIILNLKALNYSVDHATTLKQAMHIIEHKKLDLILMDRMLPDGDGIMLCEQLR QDGKEVPLMLLTAKDSEADVVLGLEAGADDYLVKPFSVLELRARVKALLRRGKTQHEQTQQIEFNSVSINSSTREVTAFN KALTLTAREFDLLLFLAKHPQQVFSRMQLLEAVWGYNYDGYEHTVNSHINRLRNKLSLCSPEHDLVKTVWGVGYKFSPPE VQAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 4e-42 | 46 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 4e-42 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | HE999704.1.gene2815. | Protein | 3e-36 | 43 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_002951.3237708.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_003923.1003749.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_002758.1121668.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_007622.3794472.p0 | Protein | 2e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_009641.5332272.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_013450.8614421.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_007793.3914279.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_002745.1124361.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_009782.5559369.p0 | Protein | 4e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_002952.2859905.p0 | Protein | 3e-38 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | AE000516.2.gene3505. | Protein | 4e-33 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | CP001918.1.gene3444. | Protein | 4e-28 | 42 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | AE015929.1.gene1106. | Protein | 3e-25 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_012469.1.7686381. | Protein | 3e-39 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | DQ212986.1.gene4.p01 | Protein | 4e-32 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_012469.1.7685629. | Protein | 2e-33 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | CP001138.1.gene2239. | Protein | 5e-29 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | NC_002695.1.916589.p | Protein | 4e-29 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | BAC0039 | Protein | 3e-29 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | BAC0596 | Protein | 5e-29 | 41 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | CP000034.1.gene2186. | Protein | 3e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | VFG1563 | Protein | 2e-42 | 46 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | VFG1702 | Protein | 2e-42 | 46 |
| Sfri_0485 | YP_749185.1 | two component transcriptional regulator, winged helix family protein | VFG1389 | Protein | 1e-29 | 41 |
