|
Name : Sfri_3960 (Sfri_3960) Accession : YP_752624.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4724855 - 4725682 bp Length : 828 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: xcv:XCV3412 ISxac2 transposase DNA sequence : GTGGTAAAGCCGTCGCGGCGGCGGGAGCTGGCGCAAAAGGCGGTGCAAGATAAAGCCATTTCGATCGCATTTGCGTGTGC CTTGTTTGGACTCAGTGAGAGCTGTTATCGCTATCAGGCAAAACTCAGTGATGAAAACGCTGCAATAGCCGACTGGTTAC AGCAACTGACATCAACCCATCGGAGTTGGGGGGTTGGGCTATGTTATTACTTTTTACGTAACGTGAAACGCTACCGATGG AACCATAAGCGGGTGTATAGGATTTACCGAGAATTGGAGCTAAATCTACGAATTAAGCCGAAGAAACGCTTGAAGCGTGA TAAACCGGACGCATTGGCGGTGCCAGAGGCAATCAATGAATGTTGGTCCATGGACTTTATGCACGACCAACTGGAAGATG GTCGCAGCATTAGGTTATTGAACGTAATTGATGATTACAACCGTGAAGGCTTGGCGATAGAGGTCGACTTCTCCTTACCT GCGGAGCGTGTGGTGAGAACATTGGATCAAATCATCGAATGGCGTGGAAAACCAAAACAGATACGCAGTGATAATGGTCC AGAGTATATAAGTGCGGTACTGGCTGCCTGGGCTGAAAAACACAATGTAGAACTGAAATTTATTCAGCCTGGCAATCCAC AGCAGAATGCCTATGTAGAACGCTATAATCGGACTGTGCGATACGAATGGCTGAGCCAATATCTTTGGAATAGTATTGCC GAGGTACAGGAACATGCGACACAATGGCTATGGTTTTATAACAATGAAAGACCCAATACAGCAATTGGTGGTGTCCCACC AAAGCAAAAACTGGCACTAGTGGCCTAA Protein sequence : MVKPSRRRELAQKAVQDKAISIAFACALFGLSESCYRYQAKLSDENAAIADWLQQLTSTHRSWGVGLCYYFLRNVKRYRW NHKRVYRIYRELELNLRIKPKKRLKRDKPDALAVPEAINECWSMDFMHDQLEDGRSIRLLNVIDDYNREGLAIEVDFSLP AERVVRTLDQIIEWRGKPKQIRSDNGPEYISAVLAAWAEKHNVELKFIQPGNPQQNAYVERYNRTVRYEWLSQYLWNSIA EVQEHATQWLWFYNNERPNTAIGGVPPKQKLALVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 1e-43 | 46 |
