|
Name : Sfri_3901 (Sfri_3901) Accession : YP_752565.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 4656670 - 4657347 bp Length : 678 bp Strand : + Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_2298 response regulator receiver:transcriptional regulatory protein, C-terminal DNA sequence : ATGCGTATTTTATTAGTAGAAGACGATAAAATGATTGGCGATGCCATGCAAAGCGCCTTAAAAGATGTCGCCTATGCGGT CGATTGGATATGCGACGGCGAAGCGGCCTTACACAGTTTACGTTGCCAGCAATATGATGTGGTGTTGCTCGACCTTGGCT TACCGAAACTGGATGGTTTGCAAGTAATGCAATATATTCGAGCTCAGCATCCCGCACTGGCGGTGATCATTCTTACCGCC AGAGACAGCCTAGAAGACCGAGTCAAAGGGCTCGATTTAGGTGCCGATGATTATCTCGTTAAGCCCTTCGATATAACCGA ACTACTGGCACGCATTCGTGCAGTAACAAGGCGCAATGCCAACCAACATACATCAGAATTAACCAATAATATTGTTTGGC TAAATCCAGCCACACATGAAGCCAAAACCCTCACTCAAGATAATATTTTACTGTCTAACCGCGAGTTCGCCCTACTGCAA ACATTGCTTATTCGACCCGGTTCGATTCATTCAAAAAGTGATTTAGAAGAACGAATTTATGGCTGGGGTGAAGAGGTAGA AAGTAATGCTGTAGAGTTTTTAATTCATTGTTTGCGTAAAAAATTGGGTACAGAAACCATTAAAAATGTCAGAGGTGTAG GATGGATGGTGTCAAAAAACGCCCCAGTAATTCGTTAA Protein sequence : MRILLVEDDKMIGDAMQSALKDVAYAVDWICDGEAALHSLRCQQYDVVLLDLGLPKLDGLQVMQYIRAQHPALAVIILTA RDSLEDRVKGLDLGADDYLVKPFDITELLARIRAVTRRNANQHTSELTNNIVWLNPATHEAKTLTQDNILLSNREFALLQ TLLIRPGSIHSKSDLEERIYGWGEEVESNAVEFLIHCLRKKLGTETIKNVRGVGWMVSKNAPVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 2e-27 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfri_3901 | YP_752565.1 | two component transcriptional regulator, winged helix family protein | VFG0473 | Protein | 8e-32 | 45 |
