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Name : rph (Sfri_3836) Accession : YP_752500.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 4574888 - 4575601 bp Length : 714 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGCCCAAGTAACCGTACACCAGCTCAAACTCGCCCTATCACTATTACGCGTTCTTTTACTGCACATGCTGAAGGCTC TGTTTTAGTTGAGTTTGGCGACACAAAAGTATTATGTACAGCAAGTTTCACTGAAGGCGTGCCGCGCTTTCTTAAAGGCC AAGGCCAAGGTTGGGTAACAGCTGAATACGGTATGTTACCGCGTTCAACTCACAGCCGCATGGACCGTGAAGCGGCTCGT GGTAAGCAGTCTGGCCGTACTCAAGAAATTCAACGTTTAATTGGTCGTGCATTACGTGCAGCTGTAGACATGAAGTTGTT AGGTGAAAACACTATCGTTATCGATTGTGATGTTATTCAAGCTGATGGCGGTACGCGTACTGCGGCTATTACTGGTGCTT GTGTGGCGTTAGTTGATGCGCTTAACTGGGCTCGTGGTAAAGGCATTATTAAAGCTAACCCACTTAAGTTTTTAATTGCA GCTGTTAGTGTTGGTATTTACAAAGGCGAAGCGATCAGTGATTTAGAATACATTGAAGACAGTGCTGCTGAAACTGACAT GAACGTTGTGATGACAGAAACCGGTAAGATTATTGAAATTCAAGGTACTGCAGAAGGCGAGCCATTTAGCCATGAAGAGT TACTTGAGTTGTTAGTGTTAGCTAAAAACAGTATTCGCGAAATTGTCGATGTGCAAAAAGCCGCATTAAGTTAA Protein sequence : MRPSNRTPAQTRPITITRSFTAHAEGSVLVEFGDTKVLCTASFTEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMDREAAR GKQSGRTQEIQRLIGRALRAAVDMKLLGENTIVIDCDVIQADGGTRTAAITGACVALVDALNWARGKGIIKANPLKFLIA AVSVGIYKGEAISDLEYIEDSAAETDMNVVMTETGKIIEIQGTAEGEPFSHEELLELLVLAKNSIREIVDVQKAALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 3e-63 | 59 |
