Gene Information

Name : Sfri_3489 (Sfri_3489)
Accession : YP_752156.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Resistance
Product : putative mercury transport protein MerC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4152932 - 4153351 bp
Length : 420 bp
Strand : -
Note : PFAM: MerC mercury resistance protein; KEGG: neu:NE0840 putative mercury transport protein

DNA sequence : 
ATGACCAATTTATTCAATATGCTGACACGCATCGGTGATAAAGCGGGCTCCTTGGGTGCTGTTATCTCTGCTATGGGCTG
CGCCATGTGTTTCCCGGCGATTGCCAGTTTGGGCGCAGCGATTGGATTAGGCTTTCTCAGCCAATGGGAAGGCCTGTTCG
TCAACACCTTATTGCCCCTATTCGCTTGGATTGCCTTAGTGCTTAACGGACTGGGCTGGTTCAGCCATAGGCAGTGGCAT
CGCAGTGCTCTGGGTATGTTCGGCCCAGCGCTACTCTTGTTATCACTCTACCCCTTGTTTCAATATGGCTGGAGTGCTTA
TGTGACCTATTCGGCGCTCGCGCTGATGGTGGCCGTTTCTGTATGGGACATTTTTTCACCCGCTAATAAGCGCTGCGACG
ATGAAAGTTGTGCCGTTTAA

Protein sequence : 
MTNLFNMLTRIGDKAGSLGAVISAMGCAMCFPAIASLGAAIGLGFLSQWEGLFVNTLLPLFAWIALVLNGLGWFSHRQWH
RSALGMFGPALLLLSLYPLFQYGWSAYVTYSALALMVAVSVWDIFSPANKRCDDESCAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13400.1 inner membrane Hg(II) uptake protein Not tested PAGI-5 Protein 7e-28 62
merC CAJ77061.1 Putative Mercury transport protein Not tested AbaR1 Protein 2e-26 60
merC ADK35782.1 MerC Not tested AbaR8 Protein 2e-26 60
merC ACN81006.1 MerC transmembrane protein Not tested AbaR5 Protein 4e-26 60
merC ABQ57372.1 MerC Not tested SGI1 Protein 9e-20 59
merC AET25398.1 MerC Not tested PAGI-2(C) Protein 9e-20 59
merC AFG30121.1 MerC Not tested PAGI-2 Protein 9e-20 59
merC AGK07022.1 MerC Not tested SGI1 Protein 9e-20 59
merC AGK07080.1 MerC Not tested SGI1 Protein 9e-20 59
merC YP_006098388.1 mercuric ion transport protein Not tested Tn2411 Protein 1e-19 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfri_3489 YP_752156.1 putative mercury transport protein MerC BAC0664 Protein 1e-22 58
Sfri_3489 YP_752156.1 putative mercury transport protein MerC BAC0226 Protein 2e-20 51