Gene Information

Name : Sfri_3464 (Sfri_3464)
Accession : YP_752134.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Virulence
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 4119681 - 4120238 bp
Length : 558 bp
Strand : +
Note : PFAM: Resolvase, N-terminal domain protein; Resolvase helix-turn-helix domain protein; KEGG: sty:HCM1.168 resolvase

DNA sequence : 
TTGCAAGGTCAACGTATCGGCTATATCCGCGTCAGCAGCTTCGACCAGAACCCTGATCGGCAACTGGAGCAAATCGAAGT
CGGTAAGGTATTCACCGATAAGGCTTCCGGCAAGGACACGCAACGTCCCGAACTTGAAAGGCTGCTGGCCTTTGTGCGCG
AGGGCGACACCGTGGTGGTGCACAGCATGGACAGGTTGGCACGCAATCTCGATGACCTGCGCCGCATCGTTCAGGGGCTG
ACACAACGGGGCGTGCGGATGGAGTTTGTCAAAGAAGGGCTGGCGTTCACCGGCGATGACTCACCGATGGCCAATTTGAT
GCTGTCGGTCATGGGGGCTTTTGCGGAGTTCGAGCGCGCACTGATCCGCGAACGCCAGCGCGAGGGAATCGTGCTGGCCA
AGCAGCGCGGTGCCTACCGGGGACGAAAGAAATCGCTGAACAGCGAACAAATTGCCAAGTTGAAACAGCGAGTCGCGGCA
GGCGATCAAAAAACCTTGGTGGCCCGTGACTTCGGCATCAGTCGCGAAACCTTGTACCAGTACCTGCGGGAAGACTGA

Protein sequence : 
MQGQRIGYIRVSSFDQNPDRQLEQIEVGKVFTDKASGKDTQRPELERLLAFVREGDTVVVHSMDRLARNLDDLRRIVQGL
TQRGVRMEFVKEGLAFTGDDSPMANLMLSVMGAFAEFERALIRERQREGIVLAKQRGAYRGRKKSLNSEQIAKLKQRVAA
GDQKTLVARDFGISRETLYQYLRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 9e-72 94
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 2e-66 84
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-63 82
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-63 82
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-63 82
res YP_005124341.1 DNA-invertase Not tested Not named Protein 4e-24 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfri_3464 YP_752134.1 resolvase domain-containing protein VFG1030 Protein 4e-64 82