Gene Information

Name : Sfri_3461 (Sfri_3461)
Accession : YP_752131.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Resistance
Product : transcriptional regulator, MerR family protein
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 4115544 - 4115984 bp
Length : 441 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: pfl:PFL_5893 Cd(II)/Pb(II)-responsive transcriptional regulator

DNA sequence : 
ATGGAAATCAGAATTGGCGACCTCGCCAAGCGCTCTGGGTGCGAGGTCGTGACCATCCGCTACTACGAGAAGGAAGGGCT
ACTGCCGAAGCCAGCGCGAAGCGGTGGCAACTTCCGGCTGTACGGTGAGGCGCACATTGAGCGCTTGCAATTCATCCGTC
ATTGCCGTTCGCTCGAGATGACGTTGAGCGAGATTCGCGCATTGCTGGGTCTGCGAGACAACCCGATGCAGGACTGTGGG
GAGGTCAACACGCTGCTGGAGGCCCATATTCAACAGGTGGAAATGCGTGTGTCCGCGCTGTTGCAGTTAAAACGGCACTT
GGTTGATTTGCGCGAGAAGTGTTCTGGCTCTCGATCTGTAGAGGCGTGCGGCATTTTGCAAGGGTTGGGCAATTGCAATT
GCCATGGTGAAAGTGCCACGAACAGTCAAACATCTGGGTAA

Protein sequence : 
MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYGEAHIERLQFIRHCRSLEMTLSEIRALLGLRDNPMQDCG
EVNTLLEAHIQQVEMRVSALLQLKRHLVDLREKCSGSRSVEACGILQGLGNCNCHGESATNSQTSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-35 56
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 7e-33 48
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 7e-33 48
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 5e-33 48
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 5e-33 48
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-32 47
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-32 47
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-32 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfri_3461 YP_752131.1 transcriptional regulator, MerR family protein BAC0301 Protein 1e-33 58
Sfri_3461 YP_752131.1 transcriptional regulator, MerR family protein BAC0058 Protein 3e-37 55