Gene Information

Name : Sfri_3434 (Sfri_3434)
Accession : YP_752106.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 4087449 - 4088123 bp
Length : 675 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; KEGG: pha:PSHAa0414 transposase

DNA sequence :
TTGAGTATATACGTTGAGCAAAGCTTTAAAGAACGGTTAAGTTTACTGCTTGATCATGAAATAACTCAGCGAGATCAGCG
TAAAATAGACCGCCTAACGAGCCTTGCAAAATTCAGAGTTGGCGGCACACTTGGCCAACTAAACTATGGTGCAGCACGGC
AACTTGATAAACCGCAGATCCGTTCATTAGCACAAGGTGAATGGCTTCGCCTTCACCAAAATATCTTGATCACCGGCGCA
ACGGGTTACGGTAAAACGTATTTAGCTTGCGCGCTTGGTCAAAACCACTGCCAACAAGGGAGCAGCGTTTATTATTTTAG
GCTCAAAGATCTATTAGAAAAGATGTTCTTAGCACAAGCCGATGGCAGTTATCGCAAACTGATCAACAAGCTTAGTAGTG
CCAGTTTACTGATCTTAGATGATTGGGGATTAGAGCCATTAACGGCGCAGCAACGTAGCGATTTACTGGAATTAATTGAT
GCAAGATACGATACAAAATCGACCTTAATAGCGAGTCAGTTACCGATAGCCAATTGGTATGAAATGATCGGAAAATCGAC
GCATGCAGATGCCATTTTAGATCGGCCTGTTCACAGGGCAATAAAGTTGGAATTAAAAGGCGAATCGATGCAAAAAAAAC
TAAACACCTTGACTGAAGTCGATCACTCAAGCTAG

Protein sequence :
MSIYVEQSFKERLSLLLDHEITQRDQRKIDRLTSLAKFRVGGTLGQLNYGAARQLDKPQIRSLAQGEWLRLHQNILITGA
TGYGKTYLACALGQNHCQQGSSVYYFRLKDLLEKMFLAQADGSYRKLINKLSSASLLILDDWGLEPLTAQQRSDLLELID
ARYDTKSTLIASQLPIANWYEMIGKSTHADAILDRPVHRAIKLELKGESMQKKLNTLTEVDHSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 2e-59 58
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 1e-59 58
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 1e-59 58
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 1e-47 49