Gene Information

Name : Sfri_3418 (Sfri_3418)
Accession : YP_752093.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : type III restriction enzyme, res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 4074001 - 4075410 bp
Length : 1410 bp
Strand : -
Note : PFAM: type III restriction enzyme, res subunit; KEGG: ppr:PBPRA1805 hypothetical protein

DNA sequence :
ATGCATCTAAGACAATGGCAATCAGAGTGCGTCAATCGCGCTCTAGAGCACTTTAGTGCCAAACATAAACACTTCCTTTG
TTTGGCAACTCCAGGCGCTGGTAAAACGATTATGGCTTCAGAAGTCGCTGTTCAGCTGCTTGAGCAAGACCTTATCGATT
TTGTACTTTGCTTTTCACCTTCGATAAATATATCGCAGGGTATCAAGCAAACTTTCTCGAAACGGCTGGAATGTCGTTTC
GATGGCGTCATAGGTGCCGTTGGTTGCTCTTATACATATCAAAGCATGCTGTCTTTCAAAGAGGATTTCTGGCAACTGTT
AAAACAAAATCGGGTACTCGTGATATTTGACGAGATCCACCATTGCTCAGGCAGCTCTCTTGAAGATGCTAACGCCTGGG
GGGAAGAGATCTTATTGAATATTCAAAGCCAAGCCGAATACACTTTAGCGTTAACTGGCACTCCGTGGCGCTCAGATCAA
GCACCGATAGCTTTATCTCGTTATACAGACCCAGACAATCAGATACAGTGTGATTATATCTACGGTTTAAGGGAAGCTGT
TGCTGATGGTGTATGCCGAAGCCCAAAGATTGTATTGATCGATAATGAAAAAATTTCTGTTACTGACGAAGAAAATGAAA
CTAAGACGTTTAATTGCCTGGATGCTCTATTCAAAGGCTCATTAGTTTCTTACCAATCGGTCATCAAAAATGATGTTGCC
ATTAGACATGCCTTAACGCTGGCGACTAACAAGCTCGACGACATAAGACTGCACAACCCTAATGCTGCTGGACTAGTAGT
TGCATCATCGATAGAGCATGCTGCATACATTCTGAATATGCTCAGAAATGAATATGCACAAACCGCTGAAATAGTTACTT
ATAAAGAAGACCTGCCTTCACTTAAAATCAACGAATTCAGGAATAGCACAACGAACTGGATAGTCAGTGTAGGCATGATT
AGCGAGGGCACCGACATTCCACGTTTGCAGGTGTGTTGTCACCTTAGCAGGGTTAAAACCGAACTCTACTTCAGGCAAGT
ATTAGGCAGAATTTTAAGAGTCGACAAGGCTACGAACCAAGATGCTTGGCTGTACACCTTTGCAGCACCAAAGCTTGTCG
AGTTTGCAAATCGTATAGCTGAAGAGATTCCAGATGTGCCAGTTGTATTCAGGGAGTCTGATACTGTTACGGTCTCCGTT
AAGCTGGGGGGAAGTGAAATAATAAGAGCAAGTTCCCCATCTCAAGATAGTCATACAGTTAGGTTTAGTACTCCACACAT
AACAGCACCAAAACACCCGTTAATAGCCGGTTCGAACAATCAAAATCTATCTTGGCCGACGTCACCATCTTTTGAGATTC
TAGGTGGCTTTAGAGAAAAGGTAGTATCTACTTTTAACTCCCCTTTTTGA

Protein sequence :
MHLRQWQSECVNRALEHFSAKHKHFLCLATPGAGKTIMASEVAVQLLEQDLIDFVLCFSPSINISQGIKQTFSKRLECRF
DGVIGAVGCSYTYQSMLSFKEDFWQLLKQNRVLVIFDEIHHCSGSSLEDANAWGEEILLNIQSQAEYTLALTGTPWRSDQ
APIALSRYTDPDNQIQCDYIYGLREAVADGVCRSPKIVLIDNEKISVTDEENETKTFNCLDALFKGSLVSYQSVIKNDVA
IRHALTLATNKLDDIRLHNPNAAGLVVASSIEHAAYILNMLRNEYAQTAEIVTYKEDLPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRVDKATNQDAWLYTFAAPKLVEFANRIAEEIPDVPVVFRESDTVTVSV
KLGGSEIIRASSPSQDSHTVRFSTPHITAPKHPLIAGSNNQNLSWPTSPSFEILGGFREKVVSTFNSPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 1e-103 52