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Name : Sfri_3414 (Sfri_3414) Accession : YP_752089.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 4068282 - 4069841 bp Length : 1560 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: pha:PSHAa0416 transposase DNA sequence : ATGATGAGAATGACCATGCCAACGGCACCTATTTCAATGCGTAAACTCAAAGAAATTTTAAGACTAAAATACGGCTGTAA ACTCAGTCATCGTCAGATAGCAAAAAGCTTATCTGTTTCACCCTCAATCGTGTCTAAATATGCCTGTAAATCAGCAGAGC TAGACATTACTTGCTGGCCGCTTGATGAGAAGTGGGATGATAACTCTCTACAACAAGCGTTTTTCAAAACAAAGCCTCGT TTAAAAGGCTTTACCATTCCTGACTGGTCGTTAGTTCAACAAGAGCTTCGGCCTAAAACCATGACGTTGTTGCTGCTTTG GGAAGAATACAAAGAGCGGCACGCGGAAGGTTTTTACAGTTACACTCACTTCTGCCGTCAGTACAAGGCATGGCTTAAAT GCCAAAAACCCTCGATGCGACAAAACCATAAAGCTGGTGAAAAACTGTTTGTGGATTACTGTGGCCCAACCATGAGTATT GTTGATAGAAGTACAGGCGAATGCCGTACTGCACAAGTATTCGTCGCGGTCATGGGGGCATCAAATTATACCTATGCCGA AGCGACTTACAGCCAGAAACTTGAAGATTGGGTGATGAGTCATGCCCGTTGTTTTGAGTTTCTTGGTGGTGTTCCTGAGC AGATCATTCCTGACAACCTTAAAAGTGCCGTCACCAAACCCTGCCGATATGAGCCTGACTTAAACCCAACCTACCAACAA CTAGCGACGCATTACGATACCGTCATTGTGCCTGCAAGACCCTATAAACCAAAGGATAAAGCCAAGGCTGAAGTGGGTGT ACAAATTGTTGAACGTTGGATCATGGCACGTCTTCGTAATGAAACCTTTTTTAGCTTGCGTCAATTAAATCTAAAGATTC AAGAATTACTCATCGATTTAAATCAGCGACAAATGAAAAAACATCCTGGCTCACGATTAAGTCAATTTGAAGCCATTGAT AAACCAGCGTTAAAACCATTGCCCTTGCAGCCTTACAGCTACACCTTAGTGAAACAAGTGAGAGTACATATTGATTATCA TATTGAGATTGAAAAGCACTATTACTCAGTGCCACATACCTTGATCAAGCAAAAACTTGAAGCACATGCCTCAGGAAAAT TGGTGACACTCTACCATCAAGGCATACGAGTCGCTGTTCACCCCAGATCATACCGAGAAGGTGCGCATACAACACTTGAG CTACATATGCCTATCGCTCACCAAAAACAACAGCAATGGACACCGCAGCGATTTGAGCGCTGGGCAAGTCAGTTTGGTAA ATCAACCGAGCAGTTTGTTATGCAATTGATGCAAGCTAAAAAGCATCCAGAGCAAAGCTACCGTGCTTGTATGGGGTTAT TAAGCCTAGGCAAGAAGTTTACAGACCAACGTCTTGAAGCCGCCTGTCATCGCGCATTAGCCACAGGTGTTACTCGCGTA AAACAAGTGAAAACCATCTTAGAAAAAGGCTTGGATAAGCAACCCTTGCCACAAGCTCAGGGTGATTCGCTACAAGATAT TGATCATAAAAATATCCGCGGCAATAACTATTACCATTAA Protein sequence : MMRMTMPTAPISMRKLKEILRLKYGCKLSHRQIAKSLSVSPSIVSKYACKSAELDITCWPLDEKWDDNSLQQAFFKTKPR LKGFTIPDWSLVQQELRPKTMTLLLLWEEYKERHAEGFYSYTHFCRQYKAWLKCQKPSMRQNHKAGEKLFVDYCGPTMSI VDRSTGECRTAQVFVAVMGASNYTYAEATYSQKLEDWVMSHARCFEFLGGVPEQIIPDNLKSAVTKPCRYEPDLNPTYQQ LATHYDTVIVPARPYKPKDKAKAEVGVQIVERWIMARLRNETFFSLRQLNLKIQELLIDLNQRQMKKHPGSRLSQFEAID KPALKPLPLQPYSYTLVKQVRVHIDYHIEIEKHYYSVPHTLIKQKLEAHASGKLVTLYHQGIRVAVHPRSYREGAHTTLE LHMPIAHQKQQQWTPQRFERWASQFGKSTEQFVMQLMQAKKHPEQSYRACMGLLSLGKKFTDQRLEAACHRALATGVTRV KQVKTILEKGLDKQPLPQAQGDSLQDIDHKNIRGNNYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 7e-160 | 61 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 1e-159 | 61 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 5e-160 | 61 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 2e-119 | 49 |
