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Name : Sfri_3372 (Sfri_3372) Accession : YP_752047.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 4019496 - 4020473 bp Length : 978 bp Strand : + Note : KEGG: son:SO3956 carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) DNA sequence : ATGGTAAATCACACTCAATTTCGTCAATGGGGCCGTAAAGTCATTGATATAGAAAAAGCTGCCTTAGATAATTTATATCA ATATGTAGACTCGGTTGAATTTGACCAAGCATGTCAATTGATCATGCAGTGCAAAGGTAAAGTGATTGTCATGGGAATGG GCAAATCTGGCCATATTGGTAACAAAATATCCGCGACCTTTGCCAGTACTGGCACACCGGCATTTTTTGTTCATCCAGGA GAAGCCAGTCATGGCGATTTGGGCGCATTAGCCAAAAATGACATTGTACTCGCCATTTCCAACTCTGGTGAGTCAAGCGA AATACTAACGTTAATGCCTGTTATCCAACGCATGGGTGTACCTGTGATTGCTGTAACTGGCAAACCAGACTCTAATATGG CACGTTTATCCAAAATCCATTTATGCATTCAAGTGCAAGAAGAAGCATGTCCATTAGGATTAGCCCCCACCTCCAGCACC ACAGCTACATTGGCTATGGGCGATGCATTAGCCATTGCTTTATTACAAGCAAAAGGTTTTACTCGTGATGACTTTGCCTT ATCACACCCAGGTGGCTCTCTTGGAAGAAAATTATTACTAAAAGTCGATGATGTCATGCATCAAGGCGATGATTTACCGA TCGTCAATGATGATATTTGTATTACTGACGCACTTTATGAAATATCTAAAAAAGGCCTTGGCATGACGGCTGTAGTCGAC CATGCCAGTAAACTCGTAGGCATTTTTACCGATGGCGATTTACGCCGGGTTATTGATGCAGACGTGAACCTTCGAACCAC TTCTATTGCTCACGTAATGACTAAAAACTGTGTTACCAGCCCTGCTGGTATTTTAGCAGCACAAGCACTGCAAATCATGG ATGAAAAGAGCATCAACGGACTGATAGTCGTTAATGAAAAACATCAACCGATCGGAGCATTAAACATGCTCGATATGGTT AAAGCTGGAGTCATTTAA Protein sequence : MVNHTQFRQWGRKVIDIEKAALDNLYQYVDSVEFDQACQLIMQCKGKVIVMGMGKSGHIGNKISATFASTGTPAFFVHPG EASHGDLGALAKNDIVLAISNSGESSEILTLMPVIQRMGVPVIAVTGKPDSNMARLSKIHLCIQVQEEACPLGLAPTSST TATLAMGDALAIALLQAKGFTRDDFALSHPGGSLGRKLLLKVDDVMHQGDDLPIVNDDICITDALYEISKKGLGMTAVVD HASKLVGIFTDGDLRRVIDADVNLRTTSIAHVMTKNCVTSPAGILAAQALQIMDEKSINGLIVVNEKHQPIGALNMLDMV KAGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-52 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-52 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-51 | 43 |
