Gene Information

Name : Sfri_3276 (Sfri_3276)
Accession : YP_751951.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : transcriptional regulators, TraR/DksA family protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 3921337 - 3921780 bp
Length : 444 bp
Strand : +
Note : TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: son:SO0874 DnaK suppressor protein

DNA sequence :
ATGCCTCAAGGCACGAAAAAACTTGGCGTACTCGCTATCGCTGGAGTAGATCCTTACCAGGAATCGGCTGGTGAAGAGTA
TATGAATACCAAGCAACGTGGTCACTTTACATTGATCCTCGAAGCATGGCGTAACCAATTGCGTGAAGAAGTCGACCGTA
CGTTAACTCACATGCAAGATGAAGCTGCAAACTTTCCTGATCCTGTCGACCGTGCAGCACAAGAAGAAGAATTCAGCTTA
GAATTACGCGCTCGTGACAGAGAACGTAAATTGATCAAAAAGATTGAAAAGACTTTACAGTTGATCAAAGAAGATGATTT
TGGTTTCTGCTTCTCATGTGGTGTAGAAATTGGTATCCGTCGACTTGAAGCTCGCCCTACAGCCGATCAATGTATCGATT
GTAAAACGTTAGCTGAAATAAAAGAAAAACAAATGGCGGGTTAA

Protein sequence :
MPQGTKKLGVLAIAGVDPYQESAGEEYMNTKQRGHFTLILEAWRNQLREEVDRTLTHMQDEAANFPDPVDRAAQEEEFSL
ELRARDRERKLIKKIEKTLQLIKEDDFGFCFSCGVEIGIRRLEARPTADQCIDCKTLAEIKEKQMAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 1e-41 65
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 1e-41 65