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Name : Sfri_3219 (Sfri_3219) Accession : YP_751894.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 3856208 - 3857758 bp Length : 1551 bp Strand : - Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: vch:VCA0988 methyl-accepting chemotaxis protein DNA sequence : ATGACCACAAAAGATCTCATCGATGAAGAAGTCACTTATCCGTCGGATTATATGATCCTTTCAACAACCGATTTAGACAG TATTATTACTCATGTTAACGATGACTTCATGGCAGTCAGTGGTTATAAAGAAGATGAGCTAATTAATAAACCCCATAATA TTGTACGCCACCCAGATATGCCTAAAGCTGCATTTAGTGACCTATGGGACACCATTAAGCAAGGGAAAAGCTGGATGGGA TTGGTGAAAAATCGCTGCAAGAATGGTCAGTATTATTGGGTTAACGCTTATGTGACCCCGATTAAACGTAACGGTATTAT TTGCGAGTACCAGTCGGTAAGAACTCAGCCAGAAGCAGAGCTCACTGAACGTGCTCAAGCCTGTTACGATGCCATTAATG CTGGCAAAGCTGCTAAGCCTAAGTTTGGTGCAAGTATTATTACTAAACTTTTTTTGGCTTGGTTGCTATCTGTTGGTTTA CTGATGTCCTTACCTTACTCAAGTGGTTTTTTCACCGTAGTCGCATTTATTGTTGCCATTATCTGTTTTTGTCGACCTCT TTATGTTCTTAAACAGCGTTTTAGTAACATGCTGATGTTAAGTGAAAAAATACATGATAATCCACTAAATCAATTTGTTT ACACCGGTTATACCGATGAGCTTTCTCACATCGAATTAAGTTTACGGATGCAAAAAGCTGAAACGCTGGCTGTGGTTGGA CGTATAAAAGACAGTGGTGAGGAATTACAGCAAGGTTTAGAAGAGCATCAACAACAAAATCAGGCCAATCAAAATCAGTT GGTAACCCAGTCACAAAACCTTGAACAAGTTGTCACTGCCATCGGCCAAATGAGCACGTCTGTTACTGATATAGCTAAAA ACACGACAAATTCAACCACAGAAATTCATCACTTAGTTGAACAAATAGAGTCAACTAAGGTGGCATTAGCCAACAGTCAA ATTGCGACTACGGAAATTAATCACTTATTGGAAAAATCCCGTATTGCTATTTCTTCGCTGAATAAGCAATGTCAAAATGT AAACCAAGTTGTTGAGGTGATCGAGAGTATTGCACTGCAAACTAACTTGCTTTCGCTCAATGCCGCCATTGAAGCCGCTA GGGCTGGAGAGGCTGGTAGAGGGTTTGCGGTGGTCGCGGATGAAGTGCGTAACTTGGCAAGTCGCTCGGCAACTTCTGCT CATGAAATACACGCTATTATAAATTCACTTAGCCGCACAACTGCAGAAGCCGTTGCACAAATGGAACAAAGCCATGCGTT AACAGATAAGAGTATTGATTCTGGCAAAATGCTCGAGAAAAGCCTGATTTCGGTTAGTGAAGTGATGAGTATTATCGAAA GTAATGGCGAACAGATTTCCGTAGCGGCAGAAGAGCAAGCCGCTGTTGTTAATCAAATTTATAGCAATGCGATGATATTA CAAAATGGCATAAATCAATTCGAACAAAATTGCCAAAATGCAGCAATACATAGTCAAGAAATTAGTGGTCAGGGTATACG TCAAACAGAGTTGGTAAATCAATTTAATTAA Protein sequence : MTTKDLIDEEVTYPSDYMILSTTDLDSIITHVNDDFMAVSGYKEDELINKPHNIVRHPDMPKAAFSDLWDTIKQGKSWMG LVKNRCKNGQYYWVNAYVTPIKRNGIICEYQSVRTQPEAELTERAQACYDAINAGKAAKPKFGASIITKLFLAWLLSVGL LMSLPYSSGFFTVVAFIVAIICFCRPLYVLKQRFSNMLMLSEKIHDNPLNQFVYTGYTDELSHIELSLRMQKAETLAVVG RIKDSGEELQQGLEEHQQQNQANQNQLVTQSQNLEQVVTAIGQMSTSVTDIAKNTTNSTTEIHHLVEQIESTKVALANSQ IATTEINHLLEKSRIAISSLNKQCQNVNQVVEVIESIALQTNLLSLNAAIEAARAGEAGRGFAVVADEVRNLASRSATSA HEIHAIINSLSRTTAEAVAQMEQSHALTDKSIDSGKMLEKSLISVSEVMSIIESNGEQISVAAEEQAAVVNQIYSNAMIL QNGINQFEQNCQNAAIHSQEISGQGIRQTELVNQFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-61 | 42 |
