Gene Information

Name : Sfri_3007 (Sfri_3007)
Accession : YP_751684.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport systems inner membrane component
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 3611271 - 3612170 bp
Length : 900 bp
Strand : -
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1272 polyamine ABC transporter, permease protein

DNA sequence :
ATGAAGAATCCATTGAAAATATTCAAAGGCCGACATCTCACCATGGGTATCCCTTACCTATGGTTGTTACTGTTTTTTGC
CTTACCGTTCGCCATTGTATTAAAGCTGAGCTTTTCGACTGCTGCGATTGCGATTCCACCGTACGAGCCAACGTTTAATT
ATGTTGATGAGGCGCTAAATATATTCGTTAATCTGGGTAACTATTTGTTGTTACTGCAAGATTCAATGTATTACATGGCG
TACTTAACCTCATTGAAAATGGCATTTGTTGCTACACTTGGCTGTTTGGTGCTTGGTTTTCCGATGGCTTACGCCATTGC
CCGCGCCCCCGTAAAAATGCAGGCGGTATTGCTGTTACTGGTGATGTTGCCGTCGTGGACCTCATTTTTGATCCGTGTAT
ACGCATGGATGGGTATTTTAAGTAACAACGGTTTAATTAATAACGCCTTGACTTGGTTAGGGGTTATTTCTGAACCAATC
CAAATGCTGAATACTAATTTTGCAGTATATATCGGTATCATTTACGCCTATTTGCCGTTTATGATTTTGCCGCTTTACGC
CACCCTAGTTAAATTGGATTTAAGCTTACTAGAAGCCGCTTCCGATTTAGGCTCTAGCAGTATCAATACTTTCTGGAAAA
TTACTCTGCCATTATCAATGGGCGGTGTAATCGCTGGCTCTATGTTGGTCTTTATCCCTGCCGTGGGTGAGTTTGTTATT
CCTGAACTGCTTGGTGGTCCAGACTCATTAATGATTGGTAAGGTGTTGTGGCAAGAGTTCTTTAATAACCGCGACTGGCC
AGTAGCTTCATCATTAGCGATTGTGATGCTAGCGTTATTGATTATCCCAATTACTTTGTTCCACCGTTATCAGTCACGCA
GCATGGAGAGCGACGTATGA

Protein sequence :
MKNPLKIFKGRHLTMGIPYLWLLLFFALPFAIVLKLSFSTAAIAIPPYEPTFNYVDEALNIFVNLGNYLLLLQDSMYYMA
YLTSLKMAFVATLGCLVLGFPMAYAIARAPVKMQAVLLLLVMLPSWTSFLIRVYAWMGILSNNGLINNALTWLGVISEPI
QMLNTNFAVYIGIIYAYLPFMILPLYATLVKLDLSLLEAASDLGSSSINTFWKITLPLSMGGVIAGSMLVFIPAVGEFVI
PELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLALLIIPITLFHRYQSRSMESDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 2e-36 48