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Name : Sfri_2652 (Sfri_2652) Accession : YP_751331.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : PTS system glucose-specific transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : 2.7.1.69 Position : 3181360 - 3183111 bp Length : 1752 bp Strand : - Note : KEGG: ppr:PBPRA1203 putative PTS system, glucose-specific IIBC; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC DNA sequence : ATGACATCTAAAACAATAACAGCAGCTAAACCGAAGAAGGCTATGATGAGTGGCGCATTTTCGGTTTTACAAAAAGTGGG CAAATCGGTCATGTTGCCGGTTTCCGTATTACCCGTAGCGGGTATCTTATTAGGCGTTGGGAGCGCGGGTTTTAGTGTGC TCCCCGATATCGTCAATGTGTTAATGGTACAAGCGGGCGAAGCCATTTTTAGCAATATGGGATTGCTATTCGCGATAGGT ATCGCGTTAGGATTTGCTAAAAATGATGGTGTGGCTGCTATGGCGGCCTTAGTGGGATATGCCATCATGGTTAAAACCAT CGGCGTACTTGAACCGGGTACCGATGTGGGCGTGTTTGGCGGTATGATTGCCGGTGCTATTGCTGCAGCGACCTTTAACC GTTTCTTTAAAATTCAATTGCCTTCATATCTCGGATTCTTCTCAGGTAAACGAAGTGTGCCTATTATTACTGGTTTTGGA GCGATTTTTGCGGGAGTCATCTTATCGTTCATTTGGCCTCCGATAGGCAATGCTATTGCTGTATTTTCCCATTGGGCGGC ATATCAAAACCCAACATTAGCCTTTGGTATTTATGGTGTGGTTGAGCGTTCGTTAATTCCAGCTGGTTTACACCATGTAT GGAATGTGCCTTTCTTCTTCGAAGCGGGCAATTGTGTTGACAGTTTAGGTAAACCTGCAACAGGTGTATTGACGTGTTAT TTGCAAGCGGACGATGCGAGTCGAGCTGCGGGTAATGGCTTCGGTCAACTTGCAGGAGGCTATCTGTTTAAAATGTTTGG TTTACCTGCCGCTGCAATGGCGATTTGGCATACTGCCCGTCCAGAAAATCGTGTCATGGTCGGTAGTATCATGATTTCGG CAGCGTTAACTGCATTCTTAACCGGAATTACTGAACCTATCGAGTTTGCATTTTTATTTGCTGCACCTTTACTTTATGTT GTACACGCGCTGATGGCTGGTTTTGCTTATGTGCTTGTCAATATGCTGGGTGTGGTTCATGGAACTTCTTTCTCTCATGG CTTAATCGATTTTCTTGTTCTTTCGGGGAATTCGCAAAAAATCTGGCTACTGGTGGTGCTAGGTCTCATTTATGCGGCGT TGTATTACGTAGTGTTCAGATTCTTAATTTTGAAGTTCGACTTGAAAACGCCAGGGCGGATGGATGTCGAATTAGAGATC GTTTCATCAGAAGGGACAGAAAGAGCGCGTAACTTTATCGAAGCCTTCGGCGGACCAGAGAATCTGGTCAATGTGGATTC TTGTATTACCCGCTTACGGATGGATGTGCACGATACCAGTAAAGTGGATCAGGCTAGATTGAAGCAGTTAGGCGCCAGTG GCGTATTGATTTCGGGGAATGCAGTACAAGCCATTGTGGGGACTATCGCCGAAGTGTCACGTACCGAAATTGATGAAATG CTCGCGTCGGGTGGTTATCTTTCCGCTACTCCCACGCCTGTAATAGCAACAGCAACGGTTAACATTTCAGCAAAGGATCG CGAGCAAGCTCAAGCCATCCTGCCACTATTGGGTGACGTGAGTTCATGTCGTGCTATTGCTGATAATCGTTTACGCTTAG AAGTGAAAGATGCCAGTCTATTAGACAGTACCGCCCTTCAAGCCCATGGCATTGAAGCTATGTTGGTTTTAAATCCGAAC TTGGTTCATTTAATTTTTAGTATGAATACAGCAGGACTAGCCAGCGTGTTAAATGAGACTTTTGCCGACTGA Protein sequence : MTSKTITAAKPKKAMMSGAFSVLQKVGKSVMLPVSVLPVAGILLGVGSAGFSVLPDIVNVLMVQAGEAIFSNMGLLFAIG IALGFAKNDGVAAMAALVGYAIMVKTIGVLEPGTDVGVFGGMIAGAIAAATFNRFFKIQLPSYLGFFSGKRSVPIITGFG AIFAGVILSFIWPPIGNAIAVFSHWAAYQNPTLAFGIYGVVERSLIPAGLHHVWNVPFFFEAGNCVDSLGKPATGVLTCY LQADDASRAAGNGFGQLAGGYLFKMFGLPAAAMAIWHTARPENRVMVGSIMISAALTAFLTGITEPIEFAFLFAAPLLYV VHALMAGFAYVLVNMLGVVHGTSFSHGLIDFLVLSGNSQKIWLLVVLGLIYAALYYVVFRFLILKFDLKTPGRMDVELEI VSSEGTERARNFIEAFGGPENLVNVDSCITRLRMDVHDTSKVDQARLKQLGASGVLISGNAVQAIVGTIAEVSRTEIDEM LASGGYLSATPTPVIATATVNISAKDREQAQAILPLLGDVSSCRAIADNRLRLEVKDASLLDSTALQAHGIEAMLVLNPN LVHLIFSMNTAGLASVLNETFAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 6e-78 | 41 |
