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Name : Sfri_2201 (Sfri_2201) Accession : YP_750885.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2630679 - 2632679 bp Length : 2001 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCAAATCCAAACCGTCGTCAAACTCGAGCTAACGCTCAACAATTTATTGATACCCTTAAACCGTTACAACATCCTAA CTCGGAAAAAGTCTATTTAGCGGGTAGTCGTGCTGATATCAACGTTGCTATGCGTCAAGTTAATCAAACTGATACCGTTA TTGGTGGTACCGACGCTGAACCCATTAAACAAGCCAATCCGCCGATCATGGTTTATGACTGCGCGGGTGCTTATTCTGAT CCCCTTGCTGATATCAATGTGCGTGAAGGCTTACCTAAAATCCGTCAAGCATGGATTGATGAGCGACAAGATACTGAGCA ATTAACGGGTGCAAGTTCGGGTTTTACCCAACAACGACTGGCCGACGATGGACTCGATCATTTACGATTTGACGCCTTAG TCGCGCCTAAACGTGCCAAGAAGGGCAAATGCGTGACCCAAATGTATTATGCACGCCAAGGTATTATTACCCCTGAAATG GAATACATTGCCATTCGTGAAAACATGGCTCGCGCTGAAGTAACCGATAGCGTGTTGACTCAAAAAGCCCCAGGTGAGAA TTTTGGTGCACATATTGGGCAACTTATCACTCCTGAGTTTGTCCGCGATGAAGTCGCCCGAGGTCGAGCAATTATTCCGC TGAATATTAACCATCCTGAAACTGAACCTATGATTATTGGGCGTAATTTTTTGGTGAAGGTGAATGCCAATATTGGTAAT TCGGCGGTGACATCTTCGATTGAAGAAGAAGTTGAAAAACTCGTGTGGTCTACCCGTTGGGGCGCCGATACGGTCATGGA TTTGTCGACTGGACGTTATATTCATGAAACGCGTGAGTGGCTTATCCGTAATTCGCCTGTGCCGATTGGTACTGTGCCGA TTTATCAAGCATTAGAAAAGGTTAATGGCGTTGCCGAAGACCTCAGTTGGGCGGTATTTAGAGATACATTGATTGAACAA GCCGAGCAGGGCGTAGACTATTTTACGATTCATGCAGGGGTGTTATTGCGTTATGTACCCATGACCGCCAAACGCCTTAC CGGCATTGTGTCGCGTGGCGGTTCAATTATGGCTAAGTGGTGTTTAAGTCATCATCAAGAAAGTTTCTTATATGAACATT TTCGCGATATTTGCCAAATTTGCGCCCAATACGATGTGTCGTTGTCGTTAGGGGATGGTATGCGCCCCGGTTCAATTGCC GACGCCAATGATGAAGCGCAATTTGCGGAATTAGAAACCTTAGGTGAATTGGTCAAAATTGCATGGGAATACGATGTGCA GACCATCATCGAAGGCCCAGGTCATGTGCCAATGCAATTGATTAAAGTCAATATGGAAAAGCAATTGGCCCTTTGTGATG AAGCGCCATTTTATACATTAGGCCCACAAACAACCGATATTGCGCCTGGCTATGATCACTTCACCTCAGGTATTGGTGCT GCCATGATGGCTTGGTACGGCGTGGCGATGTTGTGTTACGTCACCCCTAAAGAACACTTAGGTTTGCCTAACAAAGAAGA TGTAAAACAAGGCTTAATTGCCTACAAGATTGCTGCCCATGCTGCGGATGTCGCTAAAGGTCATCCAGGTGCGCAAGTAC GTGATAATGCATTATCAAAAGCCCGCTTTGAATTCCGTTGGGAAGATCAATATAACCTAGGTCTTGATCCTGATACCGCT CGTGCTTACCACGACGAATCGTTACCACAAGAATCAGCCAAAGTGGCTCATTTTTGTTCAATGTGTGGGCCTAAATTCTG TTCGATGAAAATAACCCACGAAGTACGTGAATATGCCGCGAATCTTGAACAAGCTGAAGCACTTAAGATTGAAGTATCTT CTGCTAGTGCTTATCAAGCTCTACATACGGCTCAAGCCATAAATCCGTCCGAAGCGATGGCGCAAAAGTCGGCAGAGTTC AAAGCGTCGGGCTCGGCGCTTTATCACGACGTCAAACCCGCAGCACAAGTTAATACTGACTTAACGGTAGAGGTTGAATA A Protein sequence : MSNPNRRQTRANAQQFIDTLKPLQHPNSEKVYLAGSRADINVAMRQVNQTDTVIGGTDAEPIKQANPPIMVYDCAGAYSD PLADINVREGLPKIRQAWIDERQDTEQLTGASSGFTQQRLADDGLDHLRFDALVAPKRAKKGKCVTQMYYARQGIITPEM EYIAIRENMARAEVTDSVLTQKAPGENFGAHIGQLITPEFVRDEVARGRAIIPLNINHPETEPMIIGRNFLVKVNANIGN SAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWLIRNSPVPIGTVPIYQALEKVNGVAEDLSWAVFRDTLIEQ AEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQESFLYEHFRDICQICAQYDVSLSLGDGMRPGSIA DANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHVPMQLIKVNMEKQLALCDEAPFYTLGPQTTDIAPGYDHFTSGIGA AMMAWYGVAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQVRDNALSKARFEFRWEDQYNLGLDPDTA RAYHDESLPQESAKVAHFCSMCGPKFCSMKITHEVREYAANLEQAEALKIEVSSASAYQALHTAQAINPSEAMAQKSAEF KASGSALYHDVKPAAQVNTDLTVEVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 69 |
