|
Name : Sfri_0195 (Sfri_0195) Accession : YP_748896.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : argininosuccinate lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0165 EC number : 4.3.2.1 Position : 214516 - 215946 bp Length : 1431 bp Strand : + Note : catalyzes the formation of arginine from (N-L-arginino)succinate DNA sequence : ATGACTTACAGCTATATTATTAAACACCCAGTTCTTAAAACAGTTTTCAAAACAGAGGATACCGACATGGCGTTATGGGG CGGAAGATTTCAGGGCGAAACCAGTGCACTTTTCAAGTTATTTAATGACTCACTGCCAGTGGATTACCGCTTATTTGAAC AAGATGTAGTCGGTTCTATCGCATGGGCAGACGCCATTGCTAGCGTCGGTATTATTACTGCCAAAGAATGTACTGATCTA AAAGCAGCATTAAACGAATTGCTGGTGGAAGTAGGTAACGATCCTCAAGCTATTATTAGCAACGGCGCTGAAGATATTCA CAGCTTTGTTGAACAAAAGCTGATTGCCAAAGTGGGCGATTTAGGTAAAAAACTCCACACGGGCCGTTCACGTAACGACC AAGTCGCCACAGATTTAAAACTGTGGTGCAAAAAAGAAGGCGCTGCATTACTTGCGCGTTTAGGTACATTACATGCAGAG TTGATTGCATTAGCCGAGCGTGAAGTTGACGCAGTGATGCCGGGGTACACCCATTTACAGCGTGCTCAGCCGGTTACATT TGGTCACTGGGCGTTAGCCTATGTAGAAATGTACGAGCGTGACATTAGCCGCCTGCAAGATGCTCTAAACCGTGCCGATT CATGTCCATTAGGTTCTGGCGCACTCGCTGGTACTGCTTATCCGATTGATCGCCACGCGTTAGCGGCGGCATTAAACTTT GCTCGCCCAACCTTAAACAGCTTAGACAGTGTGTCGGATCGCGACCATGTGGTTGAATTATGCAGCGCAGCGTCAATCAG CATGATGCATTTAAGCCGCATGGCTGAAGATTTAATCTTCTTCAACTCTGGCGAAGCTAACTTTATCTCACTAGCCGATG AAGTCACCTCTGGCTCATCTTTAATGCCACAAAAGAAAAACCCTGATGCTTTAGAGCTTATTCGTGGTAAAACCGGCCGT GTTTATGGCAGCTTAATGGGTATTTTAACCACCATGAAAGCCTTGCCATTAGCGTACAACAAAGACATGCAAGAAGACAA AGAAGGCTTGTTTGACGTAGTCGACAGCTGGGCTATTTGCTTAGACATGGCAGCATTAGTATTGTCGGGCTTAAAAGTGA ATCGTCCACAAGCCTTGGTTGCAGCTCAGCAAGGTTATGCTAACGCAACTGAACTTGCAGATTATCTTGTGGCTAAAGGC ATGCCGTTCCGTGAAGCACATCATGTAGTGGGCGAGGTGGTGGTATTTGCCATTGGTGAGCAAAAGCCGATTGAAGACTT AAGCGTGGCTGAGCTACAAAAATTTGCCAATGTGATTAGCGATGATGTGTATCCAAACCTTACGATTGAAGCGTGTTTAG AAAAACGTGATGTATTAGGTGGCACCGCCATCAATCAAGTGCAAGCGGTTATCGCGGCTAAAAAAGCATAG Protein sequence : MTYSYIIKHPVLKTVFKTEDTDMALWGGRFQGETSALFKLFNDSLPVDYRLFEQDVVGSIAWADAIASVGIITAKECTDL KAALNELLVEVGNDPQAIISNGAEDIHSFVEQKLIAKVGDLGKKLHTGRSRNDQVATDLKLWCKKEGAALLARLGTLHAE LIALAEREVDAVMPGYTHLQRAQPVTFGHWALAYVEMYERDISRLQDALNRADSCPLGSGALAGTAYPIDRHALAAALNF ARPTLNSLDSVSDRDHVVELCSAASISMMHLSRMAEDLIFFNSGEANFISLADEVTSGSSLMPQKKNPDALELIRGKTGR VYGSLMGILTTMKALPLAYNKDMQEDKEGLFDVVDSWAICLDMAALVLSGLKVNRPQALVAAQQGYANATELADYLVAKG MPFREAHHVVGEVVVFAIGEQKPIEDLSVAELQKFANVISDDVYPNLTIEACLEKRDVLGGTAINQVQAVIAAKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00324 | YP_008207789.1 | Argininosuccinate lyase | Not tested | AbaR25 | Protein | 4e-94 | 48 |
| BJAB0868_00328 | YP_008211654.1 | Argininosuccinate lyase | Not tested | AbaR26 | Protein | 4e-94 | 48 |
