Gene Information

Name : Sfri_0195 (Sfri_0195)
Accession : YP_748896.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : 4.3.2.1
Position : 214516 - 215946 bp
Length : 1431 bp
Strand : +
Note : catalyzes the formation of arginine from (N-L-arginino)succinate

DNA sequence :
ATGACTTACAGCTATATTATTAAACACCCAGTTCTTAAAACAGTTTTCAAAACAGAGGATACCGACATGGCGTTATGGGG
CGGAAGATTTCAGGGCGAAACCAGTGCACTTTTCAAGTTATTTAATGACTCACTGCCAGTGGATTACCGCTTATTTGAAC
AAGATGTAGTCGGTTCTATCGCATGGGCAGACGCCATTGCTAGCGTCGGTATTATTACTGCCAAAGAATGTACTGATCTA
AAAGCAGCATTAAACGAATTGCTGGTGGAAGTAGGTAACGATCCTCAAGCTATTATTAGCAACGGCGCTGAAGATATTCA
CAGCTTTGTTGAACAAAAGCTGATTGCCAAAGTGGGCGATTTAGGTAAAAAACTCCACACGGGCCGTTCACGTAACGACC
AAGTCGCCACAGATTTAAAACTGTGGTGCAAAAAAGAAGGCGCTGCATTACTTGCGCGTTTAGGTACATTACATGCAGAG
TTGATTGCATTAGCCGAGCGTGAAGTTGACGCAGTGATGCCGGGGTACACCCATTTACAGCGTGCTCAGCCGGTTACATT
TGGTCACTGGGCGTTAGCCTATGTAGAAATGTACGAGCGTGACATTAGCCGCCTGCAAGATGCTCTAAACCGTGCCGATT
CATGTCCATTAGGTTCTGGCGCACTCGCTGGTACTGCTTATCCGATTGATCGCCACGCGTTAGCGGCGGCATTAAACTTT
GCTCGCCCAACCTTAAACAGCTTAGACAGTGTGTCGGATCGCGACCATGTGGTTGAATTATGCAGCGCAGCGTCAATCAG
CATGATGCATTTAAGCCGCATGGCTGAAGATTTAATCTTCTTCAACTCTGGCGAAGCTAACTTTATCTCACTAGCCGATG
AAGTCACCTCTGGCTCATCTTTAATGCCACAAAAGAAAAACCCTGATGCTTTAGAGCTTATTCGTGGTAAAACCGGCCGT
GTTTATGGCAGCTTAATGGGTATTTTAACCACCATGAAAGCCTTGCCATTAGCGTACAACAAAGACATGCAAGAAGACAA
AGAAGGCTTGTTTGACGTAGTCGACAGCTGGGCTATTTGCTTAGACATGGCAGCATTAGTATTGTCGGGCTTAAAAGTGA
ATCGTCCACAAGCCTTGGTTGCAGCTCAGCAAGGTTATGCTAACGCAACTGAACTTGCAGATTATCTTGTGGCTAAAGGC
ATGCCGTTCCGTGAAGCACATCATGTAGTGGGCGAGGTGGTGGTATTTGCCATTGGTGAGCAAAAGCCGATTGAAGACTT
AAGCGTGGCTGAGCTACAAAAATTTGCCAATGTGATTAGCGATGATGTGTATCCAAACCTTACGATTGAAGCGTGTTTAG
AAAAACGTGATGTATTAGGTGGCACCGCCATCAATCAAGTGCAAGCGGTTATCGCGGCTAAAAAAGCATAG

Protein sequence :
MTYSYIIKHPVLKTVFKTEDTDMALWGGRFQGETSALFKLFNDSLPVDYRLFEQDVVGSIAWADAIASVGIITAKECTDL
KAALNELLVEVGNDPQAIISNGAEDIHSFVEQKLIAKVGDLGKKLHTGRSRNDQVATDLKLWCKKEGAALLARLGTLHAE
LIALAEREVDAVMPGYTHLQRAQPVTFGHWALAYVEMYERDISRLQDALNRADSCPLGSGALAGTAYPIDRHALAAALNF
ARPTLNSLDSVSDRDHVVELCSAASISMMHLSRMAEDLIFFNSGEANFISLADEVTSGSSLMPQKKNPDALELIRGKTGR
VYGSLMGILTTMKALPLAYNKDMQEDKEGLFDVVDSWAICLDMAALVLSGLKVNRPQALVAAQQGYANATELADYLVAKG
MPFREAHHVVGEVVVFAIGEQKPIEDLSVAELQKFANVISDDVYPNLTIEACLEKRDVLGGTAINQVQAVIAAKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 4e-94 48
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 4e-94 48