Gene Information

Name : Sfri_2000 (Sfri_2000)
Accession : YP_750684.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 2373828 - 2374400 bp
Length : 573 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4061 polysulfide reductase, subunit B

DNA sequence : 
ATGAGCAAACGATATGTCATGGTGCATGATGAAAATAAATGCATCGGCTGCCAAGCTTGCAATATAGCTTGTCGTAGTGA
AAACGAAGTCCCTGAAGGGGTAACACGCCTGCAAGTTAGAGTGGAAGGTCCTTTTGGTGAAGCACCAAACTTACATTTTA
AATATCACCGAGTGTCCTGTCAGCAATGCGAAGACGCACCTTGTGTCAGTGTTTGCCCTACAGGTGCTGCTTACATAGAC
GAAAATGGCTTAGTGTCTATTCATAACGATAAGTGCGTTGGCTGTATGTATTGTGTCGCGGCATGTCCATACAAAGTGCG
CTTTATGAATCCTATAACAAAGGCTGCAGACAAATGTAATTTCTGTAAAGACTCGCGCCTAACCAGAGATGAACAACCCG
CTTGCGTTACAGCATGCCCAACAGATGCATTGTATTTTGGTGATGCTAACGACAGCAAAAGTGAGGTTGCTCAATTACTG
AATACAAAAATAACCTATCAAGACAAAACGCATTTAGGTACCAAACCACGAGTGTACCGTGTTCCGACTAAACGAGGAGG
GATAGAGTCATGA

Protein sequence : 
MSKRYVMVHDENKCIGCQACNIACRSENEVPEGVTRLQVRVEGPFGEAPNLHFKYHRVSCQQCEDAPCVSVCPTGAAYID
ENGLVSIHNDKCVGCMYCVAACPYKVRFMNPITKAADKCNFCKDSRLTRDEQPACVTACPTDALYFGDANDSKSEVAQLL
NTKITYQDKTHLGTKPRVYRVPTKRGGIES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-29 41
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-29 41
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-29 41
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-29 41
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfri_2000 YP_750684.1 4Fe-4S ferredoxin VFG0486 Protein 6e-30 41