Gene Information

Name : Sfri_1950 (Sfri_1950)
Accession : YP_750634.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 2315241 - 2315834 bp
Length : 594 bp
Strand : +
Note : PFAM: phage integrase family protein; KEGG: cps:CPS_2062 site-specific recombinase, phage integrase family

DNA sequence :
ATGTGGACGAAGAAAGGTCATTTAACTGGGCAGAAAAAGCCCTTTAAGCTTGAGGATATCTGGCGTATCCGTACCAGGCT
CGAAATCGAAGGTAATATTATGGAGTTGGCTCTGCTCAACCTCGCCATCGATTGTAAATTACGTTCATGTGATTTGCTCA
GAATGAAAGTTCGAGATATTTCATCGGGTGGTGTTATTCAAAATAGAGTTCTTTATCAACAGAGTAAAACGGAACGTGAG
GTTCAATTTGAAATAACTTCTCGTACAGCTCAATCATTAACACAGTATTTAATGCAAAGTGGCTTATCGTCATCAAGTTA
TATATTCCCTAGCCCTCGTAAGAACGGGAGACCTATGAGCTATAGCTGCTATGCAACTATAATTCGTCGCTGGGCGTCAC
AACTTGGTTATGACTATTACCTGTATGGTACTCACTCTATGCGAAGAACAAAGGCAACCTTGATCTATGCACGAACGAAA
AACATCCGAGCCGTACAGCTATTGCTTGGTCACGCCAAGTTGGATAACACAATTCGTTATTTAGGGGTAGAGATGGAAGA
TGCCCTTAATATATCTGAGGATATAGAGTTGTAA

Protein sequence :
MWTKKGHLTGQKKPFKLEDIWRIRTRLEIEGNIMELALLNLAIDCKLRSCDLLRMKVRDISSGGVIQNRVLYQQSKTERE
VQFEITSRTAQSLTQYLMQSGLSSSSYIFPSPRKNGRPMSYSCYATIIRRWASQLGYDYYLYGTHSMRRTKATLIYARTK
NIRAVQLLLGHAKLDNTIRYLGVEMEDALNISEDIEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67363.1 putative recombinase Not tested PAI II CFT073 Protein 4e-43 47