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Name : Sfri_1817 (Sfri_1817) Accession : YP_750505.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : glycine betaine/L-proline ABC transporter ATPase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 2143466 - 2144704 bp Length : 1239 bp Strand : + Note : KEGG: dps:DP0206 probable glycine betaine/L-proline transport ATP-binding protein (ProV); TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase DNA sequence : ATGGAAAATATTATGGAAAAAATAGTAATAAAAAACCTCTATAAGGTTTTTGGTTCTGAGCCTCGCAAGGGAGTGAAATT ACTTGAACAAGGGAAAAGCAAAGAAGAAATTTACGAACAGACAGGGCTTACAGTTGCAGTACAAGGTGCAAGTTTTACCG TAAACAAAGGTGAAATTTTTGTCGTGATGGGTCTGTCTGGCTCAGGAAAATCAACTCTAGTAAGAATGCTAAACAGGCTC ATTGAACCAACATCTGGAGAGGTGTTAGTTGATGGTCAAAATATCCTCAAAATGAATAAGGATGAGCTGGTAAGGTTTCG CAGAAGCAAAACCAGTATGGTCTTTCAGTCTTTCGCTCTTATGCCTCATCAGACAGTGTTAGAAAATGCAGCTTTTGGCC TCGAGCTTGATGGCATGGATAAGAAACAGCGTGAAGAGCGAGCTCTAGATGCCTTAAAACAAGTCGGACTTGAAGGCTTG GAGAATGCATATCCCAATGAGTTAAGTGGTGGTATGCAGCAGCGAGTGGGATTGGCGCGAGGCTTAGCGGTTGATCCTGA TATCTTGCTCATGGATGAGGCATTTTCGGCGCTTGATCCTCTTATTAAGACAGAAATGCAGGATGAACTGTTGAAACTGC AAGACCGTCATGAGCGCACCATCATTTTTATTTCCCATGATTTAGACGAAGCATTACGTATTGGCGACCGAATTGCCATC ATGCAGGGCGGCCGAGTTATTCAAGTGGGGACGCCAGAAGAGATTTTGCAAAATCCCGCTGACGATTATGTACGCGCATT TTTCCGTGGTGTGGATCCAACCGGTGTTATCTCCGCAGGGGACATTGCCCGCGATAGCCAGCCAACGGTCGTTTGGCATA CTAAAGCAGGTAGCCCACGAGCCACATTAGAAATGTTGAGTATGAAAGATCGCGAATTTGCCTATGTACTCGACTCAGAA CATCGTTATTTGGGTGTTGTTTCTTCTGATTCTCTGCGCGACGCTATTGACCAGGGGAATGGTACCAGCAAACTTGAGCA TGCTTTCCTTACAGAAGCTAAATCGGTTCAGGAAACCGATAGCCTTCAGGACATTTTATCTTTGGTAGCATCTCATTCTT GGCCTATTCCAGTTGTAAACTCAGAAAATAGATATCGCGGAGTTGTTTCTAAAAATCTGTTTCTTCGTACCTTAAACCGT GCAGAAAAGGGGACTTATTTTGAGCAGTCAGCATCTTAG Protein sequence : MENIMEKIVIKNLYKVFGSEPRKGVKLLEQGKSKEEIYEQTGLTVAVQGASFTVNKGEIFVVMGLSGSGKSTLVRMLNRL IEPTSGEVLVDGQNILKMNKDELVRFRRSKTSMVFQSFALMPHQTVLENAAFGLELDGMDKKQREERALDALKQVGLEGL ENAYPNELSGGMQQRVGLARGLAVDPDILLMDEAFSALDPLIKTEMQDELLKLQDRHERTIIFISHDLDEALRIGDRIAI MQGGRVIQVGTPEEILQNPADDYVRAFFRGVDPTGVISAGDIARDSQPTVVWHTKAGSPRATLEMLSMKDREFAYVLDSE HRYLGVVSSDSLRDAIDQGNGTSKLEHAFLTEAKSVQETDSLQDILSLVASHSWPIPVVNSENRYRGVVSKNLFLRTLNR AEKGTYFEQSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 3e-85 | 50 |
