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Name : Sfri_1799 (Sfri_1799) Accession : YP_750487.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2121704 - 2122990 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGATCCAAAATTTTTGCGTAATGAACTGGAAATTACTGCCGAGCGTTTAGCCACTCGTGGCTTTATTCTTGATGT CGATAATTTGACCAAACTTGAAGAAAAGCGTAAATCGCTACAAGTTGCTACAGAAGACTTGCAAGCATCGCGTAACGCGA TCTCTAAGTCGATTGGTCAAGCTAAAGCACGCGGCGAAGATACCAGTTCCATTATGGCGCAAGTGGGTGATTTAGGTGCA CAGCTAGATTCAAAGAAAGCAGAGCTTGCTGAGTTGTTGCAACAGATCAATAGCATCGCCATGAGCGTGCCAAATTTGCC AGACGAATCGGCTCCCGTAGGTGCTGATGAAAACGACAATGTTGAAGTACGTCGTTGGGGCACCCCAAAAGTATTCGACT TTGAAGTGAAAGATCATATTGACTTAGGTGAAGCATTAGAAGGACTAGATTTTAAAAACGCGGTTAAAATTTCCGGCTCA CGTTTTATTATCATGCGTGGTCAAATTGCTCGCTTAAATCGTGCGTTAGGTCAGTTTATGTTAGACTTACATACCACTGA ACATGGCTATACAGAAACATACGTACCGTTATTGGTTAACGAAGAAAGCTTATTAGGCACAGGTCAATTACCTAAGTTTG GTGAAGATTTATTCCACACTAAACCGGCCACCGAAGAAGGCCAAGGTTTATCACTTATTCCAACTGCAGAAGTGCCATTA ACTAACTATGTGCGCGATATGATTGTGGATGAAACTGAACTTCCGATGAAAATGACGGCGTTAACGCCATGTTTCCGCAG TGAAGCGGGCTCTTATGGTCGTGATACTCGTGGTGTGATCCGTCTACATCAATTCGACAAAGTAGAATTAGTGCAAATTG CTCATCCAGATCATTCAATGCAAGCATTGGAAGACATTACCTCGCACGCTGAAAAAGTATTACAGTTACTTAACTTACCG TACCGCACTATGGTGCTATGTACTGGTGATATGGGCTTTGGATCAAGTAAAACCTTTGATATAGAAGTGTGGTTACCTGC GCAAAATACTTACCGAGAAATTTCATCTTGTTCAAACATGAAAGATTTCCAGGCGCGTAGAATGCAAGCTAGATACCGTA GCAAAGCAGATAACAAACCTGCTTTATTGCACACCTTAAATGGTTCAGGTTTAGCGGTTGGCCGTACGTTAGTAGCCGTA ATTGAAAACTATCAAAATCAAGATGGCACCATCACAGTACCTGAAGCTTTACGTCCATACATGGGCGGTTTAAGCCTGAT TGGTTAA Protein sequence : MLDPKFLRNELEITAERLATRGFILDVDNLTKLEEKRKSLQVATEDLQASRNAISKSIGQAKARGEDTSSIMAQVGDLGA QLDSKKAELAELLQQINSIAMSVPNLPDESAPVGADENDNVEVRRWGTPKVFDFEVKDHIDLGEALEGLDFKNAVKISGS RFIIMRGQIARLNRALGQFMLDLHTTEHGYTETYVPLLVNEESLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNYVRDMIVDETELPMKMTALTPCFRSEAGSYGRDTRGVIRLHQFDKVELVQIAHPDHSMQALEDITSHAEKVLQLLNLP YRTMVLCTGDMGFGSSKTFDIEVWLPAQNTYREISSCSNMKDFQARRMQARYRSKADNKPALLHTLNGSGLAVGRTLVAV IENYQNQDGTITVPEALRPYMGGLSLIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-112 | 56 |
