Gene Information

Name : Sfri_1499 (Sfri_1499)
Accession : YP_750188.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1789209 - 1789955 bp
Length : 747 bp
Strand : +
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO2776 3-oxoacyl-[acyl-carrier protein] reductase

DNA sequence : 
ATGAGCTTTAGCATTAATTTAGACGGTAAAGTTGCCCTAGTAACAGGTGCTAGTCGTGGTATTGGGCGTGCGATTGCTGA
ATCATTAGTACAAGCTGGTGCGATGGTTATCGGTACTGCAACCAGTGAAAAAGGTGCTGCGGCGATTCAAGCATACTTAG
GTGACAAAGGCTTTGGGATGGTGTTAAATGTCACTGATTCTCAATCTGTTGCTGATTTATATAGCCAGATCAAAGAAAAA
GCAGGTGAAGTTGATATTCTTATCAACAATGCGGGTATTACCCGTGACAATTTATTAATGCGGATGAAAGATGATGAGTG
GCAAGATATTATTGACACGAATTTGACATCCCTATTTAAATTGTCTAAACCAGTAATGCGATCTATGATGAAAAAACGTT
TCGGACGTATTATCAGTATCGGTTCTGTAGTAGGTACAATGGGTAATGCTGGCCAAGTAAATTACTCGGCAGCTAAAGCT
GGTTTGATCGGATTTACAAAATCTCTTGCAAGAGAGGTTGCATCTCGTCAAATAACAGTGAATGCTATTGCACCTGGATT
TATCCAGACAGACATGACAGATGAGCTGACAGTTGAGCAGCAACAAGCTATTATGTCGCAAGTTCCGATGGAACGATTAG
GGCAAGCACAAGAAATTGCCAATGCAGTATTGTTTTTGGCCTCGGATTCAGCCGCTTATATCACAGGCGAAACATTGCAT
GTGAATGGCGGTATGTACATGGTTTAA

Protein sequence : 
MSFSINLDGKVALVTGASRGIGRAIAESLVQAGAMVIGTATSEKGAAAIQAYLGDKGFGMVLNVTDSQSVADLYSQIKEK
AGEVDILINNAGITRDNLLMRMKDDEWQDIIDTNLTSLFKLSKPVMRSMMKKRFGRIISIGSVVGTMGNAGQVNYSAAKA
GLIGFTKSLAREVASRQITVNAIAPGFIQTDMTDELTVEQQQAIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLH
VNGGMYMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-35 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-35 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 7e-36 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 6e-36 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-36 42