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Name : Sfri_1374 (Sfri_1374) Accession : YP_750065.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1635522 - 1636535 bp Length : 1014 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: ppr:PBPRA0207 putative nucleotide sugar epimerase DNA sequence : ATGAAATATTTAGTAACAGGCGCGGCGGGCTTTATTGGTAACTTTGTTGCCGAACGCTTATGTGACCAAGGTCATGAGGT TGTCGGATTAGACAATTTAAATGATTATTACGACCCCAATCTAAAGTTAGCGCGTCTAAAACGAATCGAACATTTTAGCT CATTCCGTTTTATTAAAATGGATATAGCAGATAGAACTGCCATAGCTGAGTTGTTTGAAACAGAAAAATTTGACCGCGTT ATCCACTTAGCTGCACAAGCTGGTGTACGTTATTCTATTGAAAATCCTATGGCCTACGTCGATTCAAACTTAGTGGGTAT GGCAACAATTCTAGAAGGATGTCGTCATAATAAGGTTCAACACTTAGTTTATGCTTCATCTAGTTCGGTTTACGGCATGA ACGAAAAGATGCCTTTTTCAACAGAAGATGCCGTTGACCATCCAGTGTCACTTTATGCAGCAACGAAAAAAGCAAATGAG TTAATGGCTCATAGTTATAGCCATTTATACAATTTACCTACAACGGGTTTACGCTTCTTTACTGTCTATGGTCCATGGGG CCGTCCAGATATGGCACCATTTTTATTTACCGACGCTATTTTGAACGACAGAGAAATAAAAGTATTTAACCACGGTAAGA TGAAACGCGATTTCACTTACATCGATGATATTGTTGAAGGCATTATTCGTATTCAAGATGTAGTGCCTCAGCAAGATTCA GAAAACTCAAACACTTCACCTTCATCAAGTAAGGCTCCTTATAAAGTATTCAATATTGGCAATAACGAACCTATTGCACT GATGACCTTTATTGAAGCAATTGAAAAAGCAGCCGGTAAAATAGCAGAGAAAAATTTTATGCCAATGCAGGCAGGTGACG TACCGGCTACTTTTGCAGATATTGATAGCCTTATTGACCAAATTAACTTCAAGCCAAGCATGGCTATAGACAAAGGTATC GATAATTTTGTCCAATGGTTCATTTCTTATTACGAAATAGCAAAGAAAAAGTGA Protein sequence : MKYLVTGAAGFIGNFVAERLCDQGHEVVGLDNLNDYYDPNLKLARLKRIEHFSSFRFIKMDIADRTAIAELFETEKFDRV IHLAAQAGVRYSIENPMAYVDSNLVGMATILEGCRHNKVQHLVYASSSSVYGMNEKMPFSTEDAVDHPVSLYAATKKANE LMAHSYSHLYNLPTTGLRFFTVYGPWGRPDMAPFLFTDAILNDREIKVFNHGKMKRDFTYIDDIVEGIIRIQDVVPQQDS ENSNTSPSSSKAPYKVFNIGNNEPIALMTFIEAIEKAAGKIAEKNFMPMQAGDVPATFADIDSLIDQINFKPSMAIDKGI DNFVQWFISYYEIAKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-87 | 58 |
