Gene Information

Name : Sfri_1373 (Sfri_1373)
Accession : YP_750064.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1634326 - 1635492 bp
Length : 1167 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: ppr:PBPRA2675 putative nucleotide sugar dehydrogenase

DNA sequence : 
ATGAAAATTGCCATCGCAGGGACTGGTTACGTTGGACTATCCAATGCAATGTTACTGGCACAACACAATGAAGTGGTTGC
TGTCGATATAATAGAAGAGAAAATTAACCAGCTTAACGCTAAAATCTCACCGATAGCTGACGTTGAAATCGAAGACTTTC
TTGCAAACAAGCCATTAAACTTCACTGCGACACTTGATAAACATGCCGCCTATAAAGATGCCGATTTTGTCATTATTGCA
ACTCCAACAGATTACGACCCAGCAACTAACTACTTTAATACCTCATCGGTAGAGTCAGTCATAAAAGACGTTATTAGCAT
TAACCCTAATGCGGTGATGATCATTAAATCAACCGTACCCGTTGGTTACACTGAACGTATTAAACAAGAATTTTCAAGTG
ACAACATTCTGTTCTCGCCAGAATTTTTACGCGAAGGTAAAGCACTGCACGACAACTTGTATCCGTCACGTATTATTGTT
GGCGAACAAAGTGACCGTGCACATACCTTCGCTAACTTGTTACTGCAAGGTGCGATTAAACAAGACATTGAGGTGTTGTT
TACCCACTCAACCGAAGCTGAAGCAGTTAAGTTGTTTTCAAACACTTACCTAGCGTTACGAGTGGCTTACTTTAATGAGT
TAGACACCTATGCAGAAGCTCACGGACTCGACAGTAAACAAATTATCGATGGAGTCTGTTTAGATCCCCGCATAGGCAAT
CACTACAACAACCCATCGTTTGGCTATGGTGGCTATTGTTTACCAAAAGACACCAAGCAGTTACGTGCTAACTATGCCGA
TGTGCCAAATAACTTAATTAGTGCAATTGTTGATTCCAACACCACTCGTAAAGACTTTATTGCCGACTCAATTTTAAAGC
GCAATCCTAAAAAAGTGGGTATCTATCGCTTAATAATGAAGTCAGGCTCAGACAACTTCAGATCATCAAGTATTCAAGGG
ATCATGAAGCGCATTAAAGCCAAAGGCGTAGAAGTCATCATTTATGAACCTGTACTAGAACAAGACGAGTTCTTCCATTC
TAAAGTTTATAATGACTTAGCAGTATTCAAATTGGATGCAGATGTGATTGTGTCTAATCGTATGGCAGATGAGTTGGCCG
ATGTAGGCCATAAAGTTTATACCCGCGATTTATTTTGTACCGACTAA

Protein sequence : 
MKIAIAGTGYVGLSNAMLLAQHNEVVAVDIIEEKINQLNAKISPIADVEIEDFLANKPLNFTATLDKHAAYKDADFVIIA
TPTDYDPATNYFNTSSVESVIKDVISINPNAVMIIKSTVPVGYTERIKQEFSSDNILFSPEFLREGKALHDNLYPSRIIV
GEQSDRAHTFANLLLQGAIKQDIEVLFTHSTEAEAVKLFSNTYLALRVAYFNELDTYAEAHGLDSKQIIDGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYADVPNNLISAIVDSNTTRKDFIADSILKRNPKKVGIYRLIMKSGSDNFRSSSIQG
IMKRIKAKGVEVIIYEPVLEQDEFFHSKVYNDLAVFKLDADVIVSNRMADELADVGHKVYTRDLFCTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-92 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfri_1373 YP_750064.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 2e-99 57