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Name : Sfri_1128 (Sfri_1128) Accession : YP_749819.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Resistance Product : two component transcriptional regulator, winged helix family protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1327412 - 1328071 bp Length : 660 bp Strand : + Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2104 DNA-binding response regulator YgiX, putative DNA sequence : ATGCGAGTGTTATTAGTAGAAGATAATAAGCTGTTAGCACAAGGCATCGTGATGAGTTTAGCTAAATCAGGTATTCAGGT CGATCATTTAGCATCATATAATCAAGCTCAAATCGCTTTAGAAAATGAAGATTTTAGCGCCATTATTCTCGATTTAAGTT TACCCGATGGCAATGGTGCGGACTTATTAAAACAGTGGCGTAAAAATGGTATCTCGTTACCTATAATTGTGTTGACCGCA AATACAGATTTTGACACCCGCTTAATGTGTTTAGATATTGGTGCAGATGATTATTTAAGTAAGCCTTTTGATGTAAGGGA ATTAATTGCGAGGCTTAAAGCGATTATTCGACGTCAGCATGGCCTAGATAATAACCAATTCAGTTATGGTGCACTCAATA TTGATTTTGCCCGCTGTGAAGTTCATTTTCGCGATGAGTTAGTGTCGCTTTCACGTCGTGAATATCAATTATTACTCGAA TTTGCTCAATCAGCAGGCCGCGTGTTAACCCGTAATCAACTTGAACAGTTAACTTATGGCTGGGATGAAGTTGGCAGCAA CTCTATTGAAGTGCATATTCATCATTTACGTAAAAAAACCGCCACTGAATTGATCAAAACCGTGCGTGGTATAGGCTATA TATTAACTGAAACGGTATAG Protein sequence : MRVLLVEDNKLLAQGIVMSLAKSGIQVDHLASYNQAQIALENEDFSAIILDLSLPDGNGADLLKQWRKNGISLPIIVLTA NTDFDTRLMCLDIGADDYLSKPFDVRELIARLKAIIRRQHGLDNNQFSYGALNIDFARCEVHFRDELVSLSRREYQLLLE FAQSAGRVLTRNQLEQLTYGWDEVGSNSIEVHIHHLRKKTATELIKTVRGIGYILTETV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 2e-39 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfri_1128 | YP_749819.1 | two component transcriptional regulator, winged helix family protein | BAC0487 | Protein | 7e-35 | 41 |
