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Name : Sfri_1061 (Sfri_1061) Accession : YP_749752.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1248096 - 1250681 bp Length : 2586 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGACAGTGATTGATACCAGCGATTTAGAAAAACACACCCCGATGATGCGCCAGTATTTGGGCTTAAAAGCGGCCCATCC TGATATGTTATTGTTTTATCGAATGGGTGATTTTTATGAGCTGTTTTACGATGACGCTAAACGCGCTTCTGAAATGCTAG GTATTTCACTGACGGCTCGTGGAAAAAGCGGCGGAGACCCGATTCCCATGGCAGGCATTCCATATCACGCCGTCGAAGGC TATTTAGCAAAATTAGTTAACATTGGTCAGTCTGTGGCTATTTGTGAGCAAATTGGTGATCCAGCGACATCGAAAGGGCC CGTTGAACGCCAAGTGGTGCGTATTGTGACCCCTGGCACCTTAACCGACGAAGCTTTACTGCAAGAAAAACAAGACAATT TACTGGCGGCACTGTATCAGGGTAAAACGGGTTTTGGTTACGCGACGTTGGATATTTCATCAGGTCGTTTTGTGGTTGCT GAATTACCCACTCGTGAAGCTTTAGAAGCCGAATTACAACGCACTAATCCAGCTGAGCTACTGTACAGTGAAGATTTTAC TGACATGTTATTGATCAATAATATGAAAGGCATCCGTCGTCGCCCTGAGTGGGAGTTTGACTACGACACCTGTATTAATT TACTGCTCAATCAATTTGGCACCAAAGATTTACACGGTTTTGGAATTACTGATGCACGATTAGCGTTACAAGCTGCAGGT TGTTTAATGCAGTATGTCAAAGATACCCAAAAGATGGCGTTGCCACATATCAACTCGATTGTGCGCTTTAATCAATCAGA ATCAATTATTTTAGATGCCGCAACCAGACGTAATTTAGAGTTAACTCAAAATTTATCTGGTGGGCGGGAGAATACTCTCG CATGGGTATTGGATAATACTGCCACCCCTATGGGTAGCCGTATGTTACAACGTTGGATCCATGAGCCATTACGCAATCGT CAAACAATTCAATATCGACATAGTGCGGTCAGTGAACTGATTGAACAAGATTTGTATCAAACGTTACATGAGCAACTAAA AAGCTTAGGTGATATCGAACGTATTATGGCTCGTTTAGCACTACGTAGTGCCAGACCACGTGATTTTTCACGCTTAAAGC AAGCACTAACGCTTCTGCCTGAAATCCAGCAAACATTAGCAATATGCCAACAACCTCGATTAAACACGTTAGTACAATTA CTGGGTGAATTTCCTGAACAACACGATTTATTAGAACGCGCTATTGTAGACAACCCTCCCATGTTAATTCGTGATGGTGG CGTTATCCGTACTGGCTATAATAATGAGTTAGATGAATGGCGCAAGTTGAGTGAAGGCGCCAGTGATTATTTAGTCGAAC TTGAAGCTCGTGAGAAACAACAAACAGGGATTAATACCTTAAAAGTCGGCTATAACCGAGTTCATGGTTACTATATTGAA GTGAGCCGTTTACAGTCAGATAGAGTGCCACTGAGCTATCAGCGCCGCCAAACACTCAAAGGCACCGAACGTTATATCAC CCCAGAATTGAAAGAATACGAAGAGAAAGTACTGTCTAGCCAGGGCAAAGCACTCGCGCTTGAAAAACAACTGTGGGAAC AACTGTTTGACTTGTTGTTACCTAAACTACAAGAATTACAGCAGTTTGCAACGGCTGCTGCCGAGTTAGATATATTAAGT AACTTTGCCGAACGAGCAGAGTTATTTAATTATCAATGCCCACAAATGAGCCACGACATTGGCATTAATATTGAAGCGGG CCGCCATCCTGTCGTTGAGCGAGTTAGCCAAGCAGCGTTTATTGCTAACCCAGTTGCATTAACACCACAGCGCCAAATGC TTATTGTTACAGGCCCAAATATGGGCGGTAAATCAACCTATATGCGCCAAGTAGCATTGATTACATTAATGGCACATATC GGCTGTTTCGTTCCAGCAGACCATGCTCAAATTGGTGAAATCGACCGGATTTTTACCCGTATTGGTGCATCAGATGATTT GGCATCAGGCCGGTCAACTTTCATGGTTGAAATGACCGAAACAGCTAATATTTTACATAATGCGACTGCGAACAGTTTAG TGTTAATGGACGAAATCGGTCGCGGCACCTCAACCTATGATGGTTTGGCACTCGCTTGGTCTGCTGCTGAATATCTTGCG AAAAACGTCAGTGCCCTGACATTATTTGCTACTCATTATTTTGAGTTAACCCAATTGCCCGAGCTGTTACCGTCAGTAAT TAATGTGCATTTAGATGCAATAGAACACGACGACACAATTGCCTTTATGCATTCGGTACAAGAAGGTGCTGCAAGTAAAA GTTATGGTCTACAAGTTGCAGCCCTAGCGGGTGTTCCGGCCTCCGTCATTAAAGCGGCAAAACATAAGCTTCATCAACTG GAAAACCGAGATATGACATTATCTCAACAGAATCCAACTCAAGTGAGTATGAACTTATTACCTCCAATTCCAGAGCCATC ACTAGCACTGGAAAAGTTAGCCCAAATTAATCCAGACGAGTTGACGCCGAAGCAGGCTTTAGATTATTTGTATGAATTGA AGCGATTAAGTCACACGAACACCTAG Protein sequence : MTVIDTSDLEKHTPMMRQYLGLKAAHPDMLLFYRMGDFYELFYDDAKRASEMLGISLTARGKSGGDPIPMAGIPYHAVEG YLAKLVNIGQSVAICEQIGDPATSKGPVERQVVRIVTPGTLTDEALLQEKQDNLLAALYQGKTGFGYATLDISSGRFVVA ELPTREALEAELQRTNPAELLYSEDFTDMLLINNMKGIRRRPEWEFDYDTCINLLLNQFGTKDLHGFGITDARLALQAAG CLMQYVKDTQKMALPHINSIVRFNQSESIILDAATRRNLELTQNLSGGRENTLAWVLDNTATPMGSRMLQRWIHEPLRNR QTIQYRHSAVSELIEQDLYQTLHEQLKSLGDIERIMARLALRSARPRDFSRLKQALTLLPEIQQTLAICQQPRLNTLVQL LGEFPEQHDLLERAIVDNPPMLIRDGGVIRTGYNNELDEWRKLSEGASDYLVELEAREKQQTGINTLKVGYNRVHGYYIE VSRLQSDRVPLSYQRRQTLKGTERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLLLPKLQELQQFATAAAELDILS NFAERAELFNYQCPQMSHDIGINIEAGRHPVVERVSQAAFIANPVALTPQRQMLIVTGPNMGGKSTYMRQVALITLMAHI GCFVPADHAQIGEIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGLALAWSAAEYLA KNVSALTLFATHYFELTQLPELLPSVINVHLDAIEHDDTIAFMHSVQEGAASKSYGLQVAALAGVPASVIKAAKHKLHQL ENRDMTLSQQNPTQVSMNLLPPIPEPSLALEKLAQINPDELTPKQALDYLYELKRLSHTNT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sfri_1061 | YP_749752.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 66 |
