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Name : Sfri_1035 (Sfri_1035) Accession : YP_749726.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 1219754 - 1220899 bp Length : 1146 bp Strand : + Note : KEGG: son:SO3469 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein DNA sequence : ATGTCTAACTGGTCCACCTTTGACACCCAAATGATGAGTCGTGCCATCGCCCTTGCCGAGAAAGGCCGTTATACAACACG GCCAAATCCTTGTGTCGGTTGTGTCATTGTTTATCAGAATAAGATTATTGGTGAAGGTTATCATCAACGTGCGGGCCAAG GGCATGCCGAAGTTAATGCGCTGAAAATGGTGCATGATAATGGCTTGTCTGCTGAAGGTGCCACCGCGTATGTCACTCTT GAACCTTGTAGCCATTATGGTCGCACACCACCTTGTGCTTTAGGCTTAATTAACGCCAAAGTTGCCAGAGTTGTGGTCGC AGTGACCGATGCAAATCCTGAAGTGTCTGGCCGCGGGATTACCCTATTACGTGAGGCTGGTGTTGAGGTTGATGTTGGAT TGCTCTGCGAACAGGCCTATGACCTTAACCTAGGTTTTATGAAACGGATGAAAACAGGGCTTCCTTGGATAACCGTCAAA ATAGCCGCCAGCTTAGACGGTAAAACGGCCTTGTCTAATGGAGTGTCAAAGTGGATTACCGGCAGTGCAGCAAGAGCTGA TGTGCAAAAATACCGTGCTAGCCACTGTGCATTAATCACTGGTGTTGAAACCATTCTTGTCGATGATCCTAGCCTTAATG TGCGCTATGAGACGCTAGGTGAGTTAACCACTCGTCATACAAAAGATGAATTCTTTCAACCCTTAAGGGTTGTGCTAGAC AGTCGCGCAAGATTAACCGCAACACAGCAATTATTTTCAATTCAAAGTCCTATTTTACTGGTTTCTGGTTGCCATTATCC CGAAAGCGTCAAGGCAGAATTTCCAGAACATGTATCTTTTCTTCAGTTAACGTGTGACTCATCGGGCAGAATTCCATTGT TAGCCTTGCTAACGTATTTAGGTCAGCATGCTAATTCTGTTTTAATTGAAGCGGGGGCCACTTTAGCGGGGGCATTTGTC GCCCAAGGGCTCGTTGACGAGGTAGTGCTTTATCAAGCGCCTAAAATCCTCGGTAGCCATGGACGTAATATGTTGCAGTT ACCTGATTACAGTACAATGGAACAAACGCCTGCACTGCAACTAATTGATGAACGTAACGTAGGACAAGATAAGCGTTATA TCCTCAGATATAATCAACCCTATTAA Protein sequence : MSNWSTFDTQMMSRAIALAEKGRYTTRPNPCVGCVIVYQNKIIGEGYHQRAGQGHAEVNALKMVHDNGLSAEGATAYVTL EPCSHYGRTPPCALGLINAKVARVVVAVTDANPEVSGRGITLLREAGVEVDVGLLCEQAYDLNLGFMKRMKTGLPWITVK IAASLDGKTALSNGVSKWITGSAARADVQKYRASHCALITGVETILVDDPSLNVRYETLGELTTRHTKDEFFQPLRVVLD SRARLTATQQLFSIQSPILLVSGCHYPESVKAEFPEHVSFLQLTCDSSGRIPLLALLTYLGQHANSVLIEAGATLAGAFV AQGLVDEVVLYQAPKILGSHGRNMLQLPDYSTMEQTPALQLIDERNVGQDKRYILRYNQPY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-62 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-62 | 47 |
